Job Description P63284 Confidence 97.88% Date Thu Jan 5 12:08:03 GMT 2012 Rank 142 Aligned Residues 124 % Identity 15% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.						.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.						660	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.																	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.																	.	.	.	.	.
Query Sequence		P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	F	D	S	D	E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V	.	.	.	.	.	S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	.	.	.	.	.	G	Y	L	T
Query Conservation																																																				.	.	.	.	.																	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		K	A	E	K	P	Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I
Template Known Secondary structure		T	S		S										T	T	S	S															T	T										T	T															T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680			.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		E	A	V	R	R	R	P	Y	S	V	I	L	L	D	E	V	E	.	.	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S	N	L	G	S	D	L	I	Q	E
Query Conservation																			.	.
Alig confidence																			.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	.	.	.	.	.	.	.	.	.	.	R	V	T	K	P	N	L	V	I	F	V	G	D	A	L	A	G	N	A	I	V	E	Q
Template Known Secondary structure								T		S								S	S			S	S	S											.	.	.	.	.	.	.	.	.	.						S								T	T		T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.											.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions