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Job DescriptionP63284
Confidence96.85%DateThu Jan 5 12:08:03 GMT 2012
Rank270Aligned Residues130
% Identity25%Templatec2yyzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar abc transporter, atp-binding protein; PDBTitle: crystal structure of sugar abc transporter, atp-binding protein
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   596...600.........610.........620.. .......630.........640.........650
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Query Sequence  RPIGSFLFLGPTGVGKTELCKALANFM. FDSDEAMVRIDMSEFMEKHSVSRLVGAP. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGE. . IYFDDVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAFPLRARR
Template Known Secondary structure 
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   27..30.........40.........50......... 60.........70.........80.........90.........100....
 
   651........660.........670........ .680.........690.........700..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . PGYVGYEEGGYLTEAVRRRPYSVILLDE. VEKAHPDVFNILLQVLDDGRLTDG
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Template Sequence  ISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKH. . . . . .
Template Known Secondary structure  STTTT
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   105....110.........120.........130.........140.........150.........160.........170........
 
   703......710.........720.........730.........740.........750.........760.....
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Query Sequence  QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP
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Template Sequence  . . LQQELGITSVYVTHD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QAEAMTMASRIAVFNQ
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   179180.........190... ......200.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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