Job Description P63284 Confidence 96.07% Date Thu Jan 5 12:08:03 GMT 2012 Rank 343 Aligned Residues 97 % Identity 22% Template c2xgjA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance Resolution 2.90 Å

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		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.		.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.			640	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.																									.	.
Query SS confidence																																														.																									.	.
Query Sequence		G	Q	N	E	A	V	D	A	V	S	N	A	I	R	R	S	R	A	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	.	K	A	L	A	N	F	M	F	D	S	D	E	A	M	V	R	I	D	M	S	E	F	M	E	.	.	K	H	S	V	S	R	L	V	G
Query Conservation																																														.																									.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																									.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	D	T	A	I	S	C	I	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S	V	L	V	S	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	Q	S	L	K	N	K	Q	R	V	I	Y	T	S	P	I	K	A	L	S	N	Q	K	Y	R	E	L	L	A	E	F	G
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T	S																T	T								S	S																S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.																.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		649	650	.	.	.	.	.	.	.	.												.	660	.	.	.	.	.	.	.	.	.	670						.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		A	P	P	G	Y	V	G	Y	E	E	.	.	.	.	.	.	.	.	.	.	.	G	G	Y	L	T	E	A	V	R	R	R	P	.	.	.	.	.	Y	S	V	I	L	L	D	E	V	E	K	A	H
Query Conservation												.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		D	V	G	L	M	T	G	D	I	T	I	N	P	D	A	G	C	L	V	M	T	T	E	I	L	R	S	M	L	Y	R	G	S	E	V	M	R	E	V	A	W	V	I	F	D	E	V	H	Y	M	R
Template Known Secondary structure								S	S					T	T		S																T		T	T	G	G	G								T	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions