Job Description P63284 Confidence 97.88% Date Thu Jan 5 12:08:03 GMT 2012 Rank 141 Aligned Residues 125 % Identity 22% Template c2v9pH_ PDB info PDB header:hydrolase Chain: H: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 dna-free form Resolution 3.00 Å

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		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.			.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	F	D	S	D	E	A	M	V	R	I	D	M	S	.	.	E	F	M	E	K	H	S	V	S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	L	D	E
Query Conservation																																					.	.
Alig confidence																								.	.	.											.	.				.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.																.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	L	.	.	.	G	G	S	V	L	S	F	A	N	H	K	S	H	F	W	.	.	.	.	L	A	S	L	A	D	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	V	D	D
Template Known Secondary structure							S	S	S	S	S													.	.	.	T						G	G	G	T	T	S	T	T	T	.	.	.	.	T	G	G	G	G	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																								.	.	.																.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450				.	.	.	.	.	.	.	.	.	460	.	.	.	.	.					.	.	.	.	470	.	.	.																							.	.	.	.	.	.
		679		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.			.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.
Predicted Secondary structure			.																														.	.
Query SS confidence			.																														.	.
Query Sequence		V	.	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	.	.	F	R	N	T	V	V	I	M	T	S	N	L	G	S	D	L	I	Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F	R	P	E	F	I	N
Query Conservation			.																														.	.
Alig confidence			.																														.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Sequence		A	T	H	A	C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L	V	T	S	N	I	D	V	Q	A	E	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	Y	.	L	H	S
Template Known Secondary structure																			T	T								S	S	S															S	S		G	G	G		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	.	G	T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.																						.	.	.		.	.	.
		756	.	.	.	760	.	.	.	.				.				.	.	.	.	770	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.		.	.	.
Query SS confidence											.	.	.		.	.	.
Query Sequence		R	I	D	E	V	V	V	F	H	.	.	.	P	.	.	.	L	G	E	Q	H	I	A	S	I	A	Q	I
Query Conservation											.	.	.		.	.	.
Alig confidence				.							.	.	.		.	.	.
Template Conservation				.
Template Sequence		R	V	.	Q	T	F	R	F	E	Q	P	C	T	P	F	N	I	T	D	A	D	W	K	S	F	F	V	R
Template Known Secondary structure		T		.							S
Template Predicted Secondary structure				.
Template SS confidence
		538	.		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions