Job Description P63284 Confidence 99.29% Date Thu Jan 5 12:08:03 GMT 2012 Rank 94 Aligned Residues 214 % Identity 25% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.									.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.
Query Sequence		H	R	V	I	G	Q	N	E	A	V	D	A	V	S	N	A	I	R	R	S	R	A	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	F	D	S	.	.	.	.	.	.	.	.	D	E	A	M	V	R	I	D	M	S	E	F	M	E
Query Conservation																																																												.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		K	E	I	P	F	R	E	D	I	L	R	D	A	A	I	A	I	R	Y	F	V	K	N	E	V	K	F	S	.	.	.	.	.	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y	V	N	C	R	E	V	G	G
Template Known Secondary structure		S	S		T	T																	T	T						.	.	.	.	.							T	T	S	S																			S	S	S	S	T	T													S
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		640	.	.							.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.			660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.		.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure					.	.	.	.	.	.																		.	.																							.
Query SS confidence					.	.	.	.	.	.																		.	.																							.
Query Sequence		K	H	S	.	.	.	.	.	.	V	S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	.	.	G	Y	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	L	D	E	V	E	K	.	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R
Query Conservation					.	.	.	.	.	.																		.	.																							.
Alig confidence					.	.	.	.	.	.																		.	.																							.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	Q	A	V	L	S	S	L	A	G	K	L	T	G	F	S	V	P	K	H	G	I	N	L	G	E	Y	I	D	K	I	K	N	G	T	R	N	I	R	A	I	I	Y	L	D	E	V	D	T	L	V	K	R	R	G	G	D	I	V	L	Y	Q	L	L	R	.	.	.	.	.	.	.	.	.	.	.	S	D	A
Template Known Secondary structure																	S				S	S	S	S		T												S	S	S								T	T						S	T	T	S									T	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170												.	.	.
		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	V	V	I	M	T	S	N	L	G	S	D	L	I	Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F	R	P	E	F	I	N	R	I	D	E	V	V	V	F	H	P	L	G	E	Q	H	I	A	S	I	A	Q	I	Q	L	K	R	L	Y	K	R	L	E	E	R	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Sequence		N	I	S	V	I	M	I	S	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	V	R	D	Y	M	E	P	R	V	L	S	S	L	G	P	S	V	I	F	K	P	Y	D	A	E	Q	L	K	F	I	L	S	K	Y	A	E	Y	.	.	.	.	.	.	.	G	L
Template Known Secondary structure										S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T	S							T																										.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.																							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.
		791	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	I	H	I	S	D	E	A	L	K	L	L	S	E	N	G	Y	D	P	V	Y	G	A	R	P	L	K	R	A	I	Q	Q	Q	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	G	T	Y	D	D	E	I	L	S	Y	I	A	A	I	S	A	K	E	H	G	D	A	R	K	A	V	N	L	L	F	R	A	A	Q
Template Known Secondary structure			T	T	S			S												T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions