Job Description P63284 Confidence 99.28% Date Thu Jan 5 12:08:03 GMT 2012 Rank 95 Aligned Residues 215 % Identity 19% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																																																	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																																																	.	.	.	.	.	.	.
Query Sequence		L	D	P	V	I	G	R	D	E	E	I	R	R	T	I	Q	V	L	Q	R	R	.	.	.	.	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	V	E	G	L	A	Q	R	I	I	N	G	E	V	P	E	G	L	K	G	R	R	V	L	A	L	D	M	G	A	L	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.																																																	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																																	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		P	D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	I	L	A	P	L	Y	R	E	E	K	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	.	.	.	.	K	F	K	H	V	Y	I	N	T	R	Q	I	D	T	P	Y	R	V	L
Template Known Secondary structure			S			T	T											S	S	G	G	G	G	G	T												T	T	S	S																T		S	.	.	.	.	S													S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
										246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	V	A	G	A	K	Y	R	G	E	F	E	E	R	L	K	G	V	L	N	D	L	A	K	Q	E	G	N	V	I	L	F	I	D	E	L	H	T	M	V	G	A	G	K	A	D	G	A	M	D	A	G	N	M	L	K	P	A	L	A	R	G	E	L	H	C	V	G	A	T	T	L	D
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																															.	.	.
Template Conservation																																																								.	.	.
Template Sequence		A	D	L	L	E	S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	.	.	.	L	Y	K	L	S	R	I	N	S	E	V	N	K	I	S	F	I	G	I	T	N	D	V
Template Known Secondary structure					T	T	T	T	S					S	S	S																T			S								T							S	S		S	T		.	.	.										S											S		G
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	R	Q	Y	I	E	K	D	A	A	L	E	R	R	F	Q	K	V	F	V	A	E	P	S	V	E	D	T	I	A	I	L	R	G	L	K	E	R	Y	E	L	H	H	H	V	Q	I	T	D	P	A	I	V	A	A	A	T	L	S	H	R	Y	I	A	D	R	Q	L	P	D	K	A	I	D	L	I	D	E	A
Query Conservation
Alig confidence																																									.	.
Template Conservation																																									.	.
Template Sequence		K	F	V	D	L	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	A	E	E	L	E	D	I	L	T	K	R	A	Q	M	.	.	A	F	K	P	G	V	L	P	D	N	V	I	K	L	C	A	A	L	A	A	R	E	H	G	D	A	R	R	A	L	D	L	L	R	V	S	G	E	I
Template Known Secondary structure		G	G	G	G	G		T	T					T	T	T	T																								.	.		B		S	S		S															T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		398	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		263	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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