Job Description P63284 Confidence 99.66% Date Thu Jan 5 12:08:03 GMT 2012 Rank 68 Aligned Residues 188 % Identity 19% Template c2hcbC_ PDB info PDB header:replication Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus Resolution 3.51 Å

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		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	R	S	R	A	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	F	D	S	D	E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V	S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L
Query Conservation
Alig confidence																																																									.	.	.	.	.														.	.	.	.
Template Conservation																																																									.	.	.	.	.														.	.	.	.
Template Sequence		A	Y	E	V	V	K	E	A	L	E	N	L	G	S	L	Y	N	P	I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	R	G	Y	R	V	I	Y	S	S	A	D	D	F	.	.	.	.	.	A	Q	A	M	V	E	H	L	K	K	G	T	I	.	.	.	.	N	E	F
Template Known Secondary structure									T	T	T	T	T	T	T	S									S	S	S	S	S															T	T												.	.	.	.	.											T			.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.														.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	V	R	R	R	P	Y	S	V	I	L	L	D	E	V	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S	N	L	G	S	D	L	I	Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L
Query Conservation
Alig confidence										.	.																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	M	Y	K	S	V	D	.	.	L	L	L	L	D	D	V	Q	F	L	S	G	K	E	R	T	Q	I	E	F	F	H	I	F	N	T	L	Y	L	L	E	K	.	.	.	.	.	.	.	.	Q	I	I	L	A	S	D	R	H	P	Q	K	L	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T		S	.	.							G	G	G	G	T	T		S																T	T		.	.	.	.	.	.	.	.							S	S		G	G	G		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.		.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		G	V	V	S	H	N	F	R	P	E	F	I	N	R	I	.	D	E	V	V	V	F	H	P	L	G	E	Q	H	I	A	S	I	A	Q	I	Q	L	K	R	L	Y	K	R	L	E	E	R	G	Y	E	I	H	I	S	D	E	A	L	K	L	L	S	E	N	G	Y	D	P	V	Y	G	A	R	P	L	K	R	A	I
Query Conservation																	.
Alig confidence		.	.	.	.	.	.										.																									.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	.	.	.	.	V	S	D	R	L	V	S	R	F	E	G	G	I	L	V	E	I	E	L	D	N	K	T	R	F	K	I	I	K	E	K	L	K	E	.	.	.	.	.	.	.	.	.	F	N	L	E	L	R	K	E	V	I	D	Y	L	L	E	N	T	.	.	.	.	K	N	V	R	E	I	E	G	K	I
Template Known Secondary structure		.	.	.	.	.	.	S											S									S														.	.	.	.	.	.	.	.	.	T	T																.	.	.	.		S
Template Predicted Secondary structure		.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
								223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.										.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.
		822	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		284	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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