 |
Job Description | P63284 | Confidence | 95.75% | Date | Thu Jan 5 12:08:03 GMT 2012 |
Rank | 370 | Aligned Residues | 34 |
% Identity | 24% | Template | c2gk7A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:regulator of nonsense transcripts 1; |
PDBTitle: structural and functional insights into the human upf1 helicase core
|
Resolution | 2.80 Å |
|
  |   |
599 | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | F | L | F | L | G | P | T | G | V | G | K | T | E | L | C | K | A | L | A | N | F | M | F | D | S | D | E | A | M | V | R | I |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |
|   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
P | L | S | L | I | Q | G | P | P | G | T | G | K | T | V | T | S | A | T | I | V | Y | H | L | A | R | Q | G | N | G | P | V | L | V |
Template Known Secondary structure |   |
S |  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
486 | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|