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Job DescriptionP63284
Confidence94.85%DateThu Jan 5 12:08:03 GMT 2012
Rank464Aligned Residues280
% Identity14%Templatec2a5yB_
PDB info PDB header:apoptosisChain: B: PDB Molecule:ced-4; PDBTitle: structure of a ced-4/ced-9 complex
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   418.420.........430.........440.........450.........460.........470.........480.........490.......
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Query Sequence  RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLAR
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Template Sequence  EIECRALSTAHTRLIHDFEPRDALTYLEGKNIFTEDHSELISKMSTRLERIANFLRIYRRQASELGPLIDFFNYNN. . . .
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GGGGTTSS
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   4.....10.........20.........30.........40.........50.........60.........70.........
 
   498.500.........510.........520.........530.........540.........550.........560.........570.......
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Query Sequence  MSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV
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Template Sequence  . . . . QSHLADFLEDYIDFAINEPDLLRPVVIAPQFSRQMLDRKLLLGNVPKQMTCYIREYHVDRVIKKL. . . . . . . . . . .
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   80.........90.........100.........110.........120.........130.........140....
 
   578.580.........590.........600.........610.........620. ........630.........640. ......
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Query Sequence  DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANF. . . . MFDSDEAMVRIDMSEFMEKH. . . . . . SVSRLV
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Template Sequence  . . . . . . . . . . . . . DEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDILLML
Template Known Secondary structure  .............TTSSS
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   145....150.........160.........170.........180.........190.........200.........210.
 
   648.650.........660....... ..670.........680.........690.........700.........710........
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Query Sequence  GAPPGYVGYEEGGYLTEAVR. . . . . . . . . RRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS
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Template Sequence  KSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVV. . QEETIRWAQ. . . . . . . . . . . . . . . . ELRLRCLVTTR
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   212.......220.........230.........240.........250... ......260.. .......270...
 
   719720.........730.........740.........750........ .760.........770........
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Query Sequence  NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRID. . . EVVVFHPLGEQHIASIAQIQ
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Template Sequence  D. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VEISNAASQTCEFIEVTSLEIDECYDFLEAY
Template Known Secondary structure  B...............................GGGGGG

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   274 .....280.........290.........300.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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