Job Description P63284 Confidence 94.85% Date Thu Jan 5 12:08:03 GMT 2012 Rank 464 Aligned Residues 280 % Identity 14% Template c2a5yB_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:ced-4; PDBTitle: structure of a ced-4/ced-9 complex Resolution 2.60 Å

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		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	I	Q	L	K	L	E	Q	Q	A	L	M	K	E	S	D	E	A	S	K	K	R	L	D	M	L	N	E	E	L	S	D	K	E	R	Q	Y	S	E	L	E	E	E	W	K	A	E	K	A	S	L	S	G	T	Q	T	I	K	A	E	L	E	Q	A	K	I	A	I	E	Q	A	R	R	V	G	D	L	A	R
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		E	I	E	C	R	A	L	S	T	A	H	T	R	L	I	H	D	F	E	P	R	D	A	L	T	Y	L	E	G	K	N	I	F	T	E	D	H	S	E	L	I	S	K	M	S	T	R	L	E	R	I	A	N	F	L	R	I	Y	R	R	Q	A	S	E	L	G	P	L	I	D	F	F	N	Y	N	N	.	.	.	.
Template Known Secondary structure																					G	G	G	G							T	T	S	S										T	S	S	S																	S	S	S										T	T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	E	L	Q	Y	G	K	I	P	E	L	E	K	Q	L	E	A	A	T	Q	L	E	G	K	T	M	R	L	L	R	N	K	V	T	D	A	E	I	A	E	V	L	A	R	W	T	G	I	P	V	S	R	M	M	E	S	E	R	E	K	L	L	R	M	E	Q	E	L	H	H	R	V	I	G	Q	N	E	A	V
Query Conservation
Alig confidence		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	Q	S	H	L	A	D	F	L	E	D	Y	I	D	F	A	I	N	E	P	D	L	L	R	P	V	V	I	A	P	Q	F	S	R	Q	M	L	D	R	K	L	L	L	G	N	V	P	K	Q	M	T	C	Y	I	R	E	Y	H	V	D	R	V	I	K	K	L	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.																		S	T	T	S					T	T	T	T	S													T	T							S															.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.					.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.							.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.																					.	.	.	.	.	.
Query SS confidence																																														.	.	.	.																					.	.	.	.	.	.
Query Sequence		D	A	V	S	N	A	I	R	R	S	R	A	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	.	.	.	.	M	F	D	S	D	E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	.	.	.	.	.	.	S	V	S	R	L	V
Query Conservation																																														.	.	.	.																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.																					.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	M	C	D	L	D	S	F	F	L	F	L	H	G	R	A	G	S	G	K	S	V	I	A	S	Q	A	L	S	K	S	D	Q	L	I	G	I	N	Y	D	S	I	V	W	L	K	D	S	G	T	A	P	K	S	T	F	D	L	F	T	D	I	L	L	M	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S	S	S								S	T	T	S	S													S	S	T	B	T	T	T	B	S											S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.										.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	.	.	.	.	.	.	.	.	.	R	R	P	Y	S	V	I	L	L	D	E	V	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.														.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	E	D	D	L	L	N	F	P	S	V	E	H	V	T	S	V	V	L	K	R	M	I	C	N	A	L	I	D	R	P	N	T	L	F	V	F	D	D	V	V	.	.	Q	E	E	T	I	R	W	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	R	L	R	C	L	V	T	T	R
Template Known Secondary structure		T	T	T	S			T	T					T	T															T	T	S	T	T										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T								S
Template Predicted Secondary structure																																												.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.																	.	.	.	.	.	.	.	270	.	.	.
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.				.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		N	L	G	S	D	L	I	Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F	R	P	E	F	I	N	R	I	D	.	.	.	E	V	V	V	F	H	P	L	G	E	Q	H	I	A	S	I	A	Q	I	Q
Query Conservation																																										.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	I	S	N	A	A	S	Q	T	C	E	F	I	E	V	T	S	L	E	I	D	E	C	Y	D	F	L	E	A	Y
Template Known Secondary structure		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G	G			S																						T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274																																.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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