Job Description P63284 Confidence 94.90% Date Thu Jan 5 12:08:03 GMT 2012 Rank 452 Aligned Residues 115 % Identity 18% Template c1xpuB_ PDB info
PDB header: transcription/rnaChain: B: PDB Molecule: rho transcription termination factor;
PDBTitle: structural mechanism of inhibition of the rho transcription2 termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-3 dihydrobicyclomycin (fpdb)
Resolution 3.05 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
167 . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
D L T E R A E Q G K L D P V I G R D E E I R R T I Q V L Q R R T K N N P V L I G E P G V G K T A I V E G L A Q R I I N G E V P E G L K G R R V L A L D M G A .
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Query Conservation
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Template Conservation
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Template Sequence
N L T P L H A N S R L R M G S T E D L T A R V L D L A S P I G R G Q R G L I V A P P K A G K T M L L Q N I A Q S I A Y N H P .
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D C V L M V L L I D E R P
Template Known Secondary structure
G G G S S T S T T S S S S T . . . . . T S
Template Predicted Secondary structure
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Template SS confidence
135 . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . .
245 . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280 . . . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
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L V A G A K Y R G E F E E R L .
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K G V L N D L A K Q E G N V I L F I D E L H T M V G A
Query Conservation
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Alig confidence
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Template Conservation
Template Sequence
E E V T E M Q R L V K G E V V A S T F D E P A S R H V Q V A E M V I E K A K R L V E H K K D V I I L L D S I T R L A R A
Template Known Secondary structure
S S T T S T T S
Template Predicted Secondary structure
Template SS confidence
214 . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
