Job Description P63284 Confidence 100.00% Date Thu Jan 5 12:08:03 GMT 2012 Rank 1 Aligned Residues 798 % Identity 55% Template c1qvrB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb Resolution 3.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	L	T	N	K	F	Q	L	A	L	A	D	A	Q	S	L	A	L	G	H	D	N	Q	F	I	E	P	L	H	L	M	S	A	L	L	N	Q	E	G	G	S	V	S	P	L	L	T	S	A	G	I	N	A	G	Q	L	R	T	D	I	N	Q	A	L	N	R	L	P	Q	V	E	G	T	G	G	D	V	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	W	T	Q	A	A	R	E	A	L	A	Q	A	Q	V	L	A	Q	R	M	K	H	Q	A	I	D	L	P	H	L	W	A	V	L	L	K	D	E	R	S	L	A	W	R	L	L	E	K	A	G	A	D	P	K	A	L	K	E	L	Q	E	R	E	L	A	R	L	P	K	V	E	G	A	E	V	G	Q	Y	L
Template Known Secondary structure																						T	T		S														S	T	T	S								T	T	T																T	S					G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	D	L	V	R	V	L	N	L	C	D	K	L	A	Q	K	R	G	D	N	F	I	S	S	E	L	F	V	L	A	A	L	E	S	R	G	T	L	A	D	I	L	K	A	A	G	A	T	T	A	N	I	T	Q	A	I	E	Q	M	R	G	G	E	S	V	N	D	Q	G	A	E	D	Q	R	Q	A	L	K	K
Query Conservation
Alig confidence																																			.																					.	.	.	.	.	.	.
Template Conservation																																			.																					.	.	.	.	.	.	.
Template Sequence		T	S	R	L	S	G	A	L	N	R	A	E	G	L	M	E	E	L	K	D	R	Y	V	A	V	D	T	L	V	L	A	L	A	.	E	A	T	P	G	L	P	G	L	E	A	L	K	G	A	L	K	E	L	R	.	.	.	.	.	.	.	G	G	R	T	V	Q	T	E	H	A	E	S	T	Y	N	A	L	E	Q
Template Known Secondary structure																		S	S	S		S	S												.			S	T	T	S												T	T		.	.	.	.	.	.	.				S			S	S	S		S				S
Template Predicted Secondary structure																																			.																					.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	I	D	L	T	E	R	A	E	Q	G	K	L	D	P	V	I	G	R	D	E	E	I	R	R	T	I	Q	V	L	Q	R	R	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	V	E	G	L	A	Q	R	I	I	N	G	E	V	P	E	G	L	K	G	R	R	V	L	A	L	D	M	G
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		Y	G	I	D	L	T	R	L	A	A	E	G	K	L	D	P	V	I	G	R	D	E	E	I	R	R	V	I	Q	I	L	L	R	R	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	V	E	G	L	A	Q	R	I	V	K	G	D	V	P	E	G	L	K	G	K	R	I	V	S	L	Q	.	.
Template Known Secondary structure													T		S					S												T	T		S	S	S									T	T	S																T		S		T	T	S	T	T								.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	A	G	A	K	Y	R	G	E	F	E	E	R	L	K	G	V	L	N	D	L	A	K	Q	E	G	N	V	I	L	F	I	D	E	L	H	T	M	V	G	A	G	K	A	D	G	A	M	D	A	G	N	M	L	K	P	A	L	A	R	G	E	L	H	C	V	G	A	T	T	L	D	E	Y	R	Q	Y	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	.	.	.	.	.	.	.	M	E	F	E	E	R	L	K	A	V	I	Q	E	V	V	Q	S	Q	G	E	V	I	L	F	I	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	P	A	L	A	R	G	E	L	R	L	I	G	A	T	T	L	D	E	Y	R	E	.	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																T	T		S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T															T	.	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
											234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	D	A	A	L	E	R	R	F	Q	K	V	F	V	A	E	P	S	V	E	D	T	I	A	I	L	R	G	L	K	E	R	Y	E	L	H	H	H	V	Q	I	T	D	P	A	I	V	A	A	A	T	L	S	H	R	Y	I	A	D	R	Q	L	P	D	K	A	I	D	L	I	D	E	A	A	S	S	I	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	D	P	A	L	E	R	R	F	Q	P	V	Y	V	D	E	P	T	V	E	E	T	I	S	I	L	R	G	L	K	E	K	Y	E	V	H	H	G	V	R	I	S	D	S	A	I	I	A	A	A	T	L	S	H	R	Y	I	T	E	R	R	L	P	D	K	A	I	D	L	I	D	E	A	A	A	R	L	R	M
Template Known Secondary structure		G	G						T	T																													T	T																					S	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	D	S	K	P	E	E	L	D	R	L	D	R	R	I	I	Q	L	K	L	E	Q	Q	A	L	M	K	E	S	D	E	A	S	K	K	R	L	D	M	L	N	E	E	L	S	D	K	E	R	Q	Y	S	E	L	E	E	E	W	K	A	E	K	A	S	L	S	G	T	Q	T	I	K	A	E	L	E	Q	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	E	S	A	P	E	E	I	D	A	L	E	R	K	K	L	Q	L	E	I	E	R	E	A	L	K	K	E	K	D	P	D	S	Q	E	R	L	K	A	I	E	A	E	I	A	K	L	T	E	E	I	A	K	L	R	A	E	W	E	R	E	R	E	I	L	R	K	L	R	E	A	Q	H	R	L	D	E	V	R
Template Known Secondary structure				T	S																							T	S	S			T	T	T	T											G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	E	Q	A	R	R	V	G	D	L	A	R	M	S	E	L	Q	Y	G	K	I	P	E	L	E	K	Q	L	E	A	A	T	Q	L	E	G	K	T	M	R	L	L	R	N	K	V	T	D	A	E	I	A	E	V	L	A	R	W	T	G	I	P	V	S	R	M	M	E	S	E	R	E	K	L	L	R	M	E
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		R	E	I	E	L	A	E	R	Q	Y	D	L	N	R	A	A	E	L	R	Y	G	E	L	P	K	L	E	A	E	V	E	A	L	.	S	E	K	L	R	G	A	R	F	V	R	L	E	V	T	E	E	D	I	A	E	I	V	S	R	W	T	G	I	P	V	S	K	L	L	E	G	E	R	E	K	L	L	R	L	E
Template Known Secondary structure											T										T	T													.			T	T	S	S		T	T																T	T	S	S						T	T									S
Template Predicted Secondary structure																																			.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	H	H	R	V	I	G	Q	N	E	A	V	D	A	V	S	N	A	I	R	R	S	R	A	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	F	D	S	D	E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	H	K	R	V	V	G	Q	D	E	A	I	R	A	V	A	D	A	I	R	R	A	R	A	G	L	K	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	A	K	T	L	A	A	T	L	F	D	T	E	E	A	M	I	R	I	D	M	T	E	Y	M	E	K	H	A	V
Template Known Secondary structure						T	T	S		S																G	G	G	T	S		S	S	S		S						B	S	S	S	S	S	S														S	S	G	G	G						T	T	T			S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	L	D	E	V	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S	N	L	G	S	D
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	F	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	I	L	D	D	G	R	L	T	D	S	H	G	R	T	V	D	F	R	N	T	V	I	I	L	T	S	N	L	G	S	P
Template Known Secondary structure		G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S						S	S	G	G	G	S													T	T	T					S	S	S						T	T									T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		634	.	.	.															.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
		724	.	.	.		.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		L	I	Q	E	.	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F	R	P	E	F	I	N	R	I	D	E	V	V	V	F	H	P	L	G	E	Q	H	I	A	S	I	A	Q	I	Q	L	K	R	L	Y	K	R	L	E	E	R	G	Y	E	I	H	I	S	D	E	A	L	K	L
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		L	I	L	E	G	L	Q	K	G	W	P	Y	E	R	I	R	D	E	V	F	K	V	L	Q	Q	H	F	R	P	E	F	L	N	R	L	D	E	I	V	V	F	R	P	L	T	K	E	Q	I	R	Q	I	V	E	I	Q	L	S	Y	L	R	A	R	L	A	E	K	R	I	S	L	E	L	T	E	A	A	K	D	F
Template Known Secondary structure									T	T															T	T	T	S							T		S	B			B																										T	T	T
Template Predicted Secondary structure
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.
		803	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	E	N	G	Y	D	P	V	Y	G	A	R	P	L	K	R	A	I	Q	Q	Q	I	E	N	P	L	A	Q	Q	I	L	S	G	E	L	V	P	G	K	V	I	R	L	E	V	N	E	D	R	I	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	E	R	G	Y	D	P	V	F	G	A	R	P	L	R	R	V	I	Q	R	E	L	E	T	P	L	A	Q	K	I	L	A	G	E	V	K	E	G	D	R	V	Q	V	D	V	G	P	A	G	L	V	F
Template Known Secondary structure								B	T	T	T	B	T	S										T											T	S	S		T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		794	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.