Job Description P63284 Confidence 99.78% Date Thu Jan 5 12:08:03 GMT 2012 Rank 49 Aligned Residues 217 % Identity 20% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	R	M	M	E	S	E	R	E	K	L	L	R	M	E	Q	E	L	H	H	R	V	I	G	Q	N	E	A	V	D	A	V	S	N	A	I	R	R	S	R	A	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	F	D	S	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Sequence		E	A	P	K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	.	.	.	.	.	.	.	.	.	.	.	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	R
Template Known Secondary structure								G	G	G	S	S	S										.	.	.	.	.	.	.	.	.	.	.															T	T													T	T	S	S												T	.	.	.	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.							.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V	S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	L	D	E	V	E	K	A	.	.	.	.	.	.	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T
Query Conservation																																																										.	.	.	.	.	.
Alig confidence													.	.	.	.	.									.	.	.	.	.																												.	.	.	.	.	.																	.	.
Template Conservation													.	.	.	.	.									.	.	.	.	.																																																		.	.
Template Sequence		V	P	F	I	T	A	S	G	S	D	F	.	.	.	.	.	V	E	M	F	V	G	V	G	.	.	.	.	.	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	F	E	.	.
Template Known Secondary structure													.	.	.	.	.			S	T	T	T			.	.	.	.	.													T	S		S							T																							T	T			.	.
Template Predicted Secondary structure													.	.	.	.	.									.	.	.	.	.																																																		.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S	N	L	G	S	D	L	I	Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F	R	P	E	F	I	N	R	I	D	E	V	V	V	F	H	P	L	G	E	Q	H	I	A	S	I	A	Q	I	Q	L	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	D	T	A	I	V	V	M	A	A	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	D	I	L	D	P	A	L	L	R	P	.	.	.	.	.	.	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	I	L	R	I	H	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	T	T										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S						S	T	.	.	.	.	.	.	T	S	S																							T
Template Predicted Secondary structure		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
									291	.	.	.	.	.	.	.	.	300	.	.																		.	.	.	.	.	.	.	310	.	.	.	.							.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Y	K	R	L	E	E	R	G	Y	E	I	H	I	S	D	E	A	L	K	L	L	S	E	N	G	Y	D	P	V	Y	G	A	R	P	L	K	R	A	I	Q	Q	Q	I	E	N	P	L	A	Q
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		G	K	P	L	A	.	.	.	.	.	.	.	.	.	.	E	D	V	D	L	A	L	L	A	K	R	.	.	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E
Template Known Secondary structure		T	S		B		.	.	.	.	.	.	.	.	.	.	T	T									T	.	.		T	T																				T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		341	.	.	.	.											.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions