Job Description P63284 Confidence 99.58% Date Thu Jan 5 12:08:03 GMT 2012 Rank 82 Aligned Residues 190 % Identity 23% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.			.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		H	R	V	I	G	Q	N	E	A	V	D	A	V	S	N	A	I	R	R	S	R	A	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	F	D	S	.	.	D	E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V	S	R
Query Conservation																																																												.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																									.	.	.	.	.	.	.	.	.
Template Sequence		D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	T	G	S	M	P	.	.	.	.	.	.	.	.	.	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E
Template Known Secondary structure		G	G			S													T	T	T				.	.	.	.	.	.	.	.	.						S		T	T	S	S	T	T												G	G	G										T	T	T	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		646	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	L	D	E	V	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S	N	L	G	S	D	L	I
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		K	V	K	E	F	A	R	T	K	P	I	G	G	A	.	.	.	.	.	.	.	.	.	.	S	F	K	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	.	.	.	.	.	.	.	.	.	.	.	F	S	S	N	V	R	F	I	L	S	C	N	Y	.	.	.	.	.
Template Known Secondary structure							T	T	S			S	S	S		.	.	.	.	.	.	.	.	.	.	S								T	G	G	G	S															.	.	.	.	.	.	.	.	.	.	.	T	T	T	T								S		.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F	R	P	E	F	I	N	R	I	D	E	V	V	V	F	H	P	L	G	E	Q	H	I	A	S	I	A	Q	I	Q	L	K	R	L	Y	K	R	L	E	E	R	G	Y	E	I	H	I	S	D	E	A	L	K	L	L	S	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																										.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																										.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	K	I	I	E	P	I	Q	S	R	C	.	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	.	.	.	.	.	.	.	.	.	L	E	L	T	E	E	G	L	Q	A	I	L	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S						T	T		.																									T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																										.	.	.	.	.	.	.	.	.
Template SS confidence
																						150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.
		806	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	Y	D	P	V	Y	G	A	R	P	L	K	R	A	I	Q	Q	Q	I
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		I	A	E	.	.	.	G	D	M	R	R	A	I	N	I	L	Q	A	A	A
Template Known Secondary structure				T	.	.	.	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions