 |
Job Description | P0ABB4 | Confidence | 98.42% | Date | Thu Jan 5 11:15:05 GMT 2012 |
Rank | 41 | Aligned Residues | 122 |
% Identity | 14% | Template | d1tf7a2 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| RecA protein-like (ATPase-domain)
|
Resolution | 2.80 |
|
 |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
S | N | S | Q | E | L | L | E | T | G | I | K | V | I | D | L | M | C | P | . |
. |
F | A | K | G | G | K | V | G | L | F | G | G | A | G | V | G | K | T | V | N | M | M | E | L | I | R | N | I | A | I | E | H | S | G | Y | S | V | F | A | G | V | G | E | R | T | R | E | G | N | D | F | Y | H | E | M | T | . |
. |
. |
Query Conservation |   |
  |   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |
|   |
| . | . |
|
|   |
|
|
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|
|   |   |
|
|   |
|   |   |   |   |   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   | . |   |   |
|   |   |
|   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
R | S | S | N | V | R | V | S | S | G | V | V | R | L | D | E | M | C | G | G | G | F | F | K | D | S | I | I | L | A | T | G | A | T | G | T | G | K | T | L | L | V | S | R | F | V | E | N | A | C | . |
A | N | K | E | R | A | I | L | F | A | Y | E | E | S | R | A | Q | L | L | R | N | A | Y | S | W | G | M | D | F |
Template Known Secondary structure |   |
|
|
|
|
|  |  |
|
| S |
|  |  |  |  |  |  | T | T | S | S |  |  | S | S |
|  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T | T |
|
|  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | |
. | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
  |
  |   |
196 | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | N | V | I | D | K | V | S | L | V | Y | G | Q | M | N | E | P | P | G | N | R | L | R | V | A | L | T | G | L | T | M | A | E | K | F | R | D | E | G | R | D | V | L | L | F | V | D | N | I | Y | R | Y |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|
|
|   |
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|
|   |   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|
Template Sequence |   |
E | E | M | E | R | Q | N | L | L | K | I | V | C | A | Y | P | E | S | . |
. |
. |
. |
. |
A | G | L | E | D | H | L | Q | I | I | K | S | E | I | N | D | F | K | P | A | R | I | A | I | D | S | L | S | A | L |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S |  |  |  |
|
|
|
| G | G | G | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|