Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABB4
Confidence100.00%DateThu Jan 5 11:15:05 GMT 2012
Rank18Aligned Residues272
% Identity72%Templated1skye3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.... .....110.........120.........130.........140.........150....
Predicted Secondary structure 



















.

































Query SS confidence 




























.

















































Query Sequence  IEVPVGKATLGRIMNVLGEPVDMKGEIGE. EERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGV
Query Conservation    



  






  
 


       .    

    
    
  
 


 






 
 


 


  
 
  
 
Alig confidence 




























.

















































Template Conservation 
 
 

  






  
 


            

         
    
 
 


 


 
 


 


  
 
  
 
Template Sequence  ISVPVGQVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGV
Template Known Secondary structure 

SGGGTT

TTS
B
SSS



TTS
S





GGGB

S



S
S
TT


SSS
Template Predicted Secondary structure 




















































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   155....160.........170.........180.........190.........200.........210.........220.........230...
Predicted Secondary structure 




















.
Query SS confidence 














































































.
Query Sequence  GKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD.
Query Conservation 


 
   
          
 
   



  

 
          
  



 



     
  
   
 







.
Alig confidence 














































































.
Template Conservation 


 
   
            
  




  

 
             



 

 
     
      
   

  
 
Template Sequence  GKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDE
Template Known Secondary structure 
T


SS
TSGGGG
TTS
Template Predicted Secondary structure 




















Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  EGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTF
Query Conservation   
  


  




 
 
 




 


 
   


  

  
  
 



    





  
    

  


     
Alig confidence 















































































Template Conservation   
  



 




 
 
 


    

 
   
 
         
 



    



 
  
     
  


 
   
Template Sequence  QGQDGLLFIDNIFRFTQAGSEVSALLGRMPSAIGYQPTLATEMGQLQERITSTAKGSITSIQAIYVPADDYTDPAPATTF
Template Known Secondary structure  S


TT



GGG

TTTTSS
BSS



STT
SSS
Template Predicted Secondary structure 





























Template SS confidence 















































































   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   314.....320.........330.........340.......
Predicted Secondary structure 

















Query SS confidence 

































Query Sequence  AHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDP
Query Conservation 

 

 




 

  
 






 
 

    
Alig confidence 

































Template Conservation     

 
 
 
 

     



   
 

    
Template Sequence  SHLDATTNLERKLAEMGIYPAVDPLVSTSRALAP
Template Known Secondary structure  TT
SB
TTT
SS
B
TTT

BTT


Template Predicted Secondary structure 





















Template SS confidence 

































   323......330.........340.........350......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions