Job Description P0ABB4 Confidence 95.89% Date Thu Jan 5 11:15:05 GMT 2012 Rank 92 Aligned Residues 103 % Identity 19% Template c3iytG_ PDB info PDB header:apoptosis Chain: G: PDB Molecule:apoptotic protease-activating factor 1; PDBTitle: structure of an apoptosome-procaspase-9 card complex Resolution 9.50 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																	.	.																				.	.	.																					.	.	.	.	.
Query SS confidence																	.	.																				.	.	.																					.	.	.	.	.
Query Sequence		I	K	V	I	D	L	M	C	P	F	A	K	G	G	K	.	.	V	G	L	F	G	G	A	G	V	G	K	T	V	N	M	M	E	L	I	.	.	.	R	N	I	A	I	E	H	S	G	Y	S	V	F	A	G	V	G	E	R	T	.	.	.	.	.	R	E	G	N	D	F	Y	H	E	M	T	D	S	N	V	I
Query Conservation																	.	.																				.	.	.																					.	.	.	.	.
Alig confidence																	.	.																				.	.	.																					.	.	.	.	.															.	.
Template Conservation																																																																																.	.
Template Sequence		V	N	A	I	Q	Q	K	L	S	K	L	K	G	E	P	G	W	V	T	I	H	G	M	A	G	C	G	K	S	V	L	A	A	E	A	V	R	D	H	S	L	L	E	G	C	F	P	G	G	V	H	W	V	S	V	G	K	Q	D	K	S	G	L	L	M	K	L	Q	N	L	C	T	R	L	D	Q	D	E	.	.
Template Known Secondary structure										T	T	S	T	T	S										T	T	S	S																				T	T									S																			S	S		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	V	S	L	V	Y	G	Q	M	N	E	P	P	G	N	R	L	R	V	A	L	T	G	L	T	M	A	E	K	F	R	D	E	G	R	D	V	L	L	F	V	D	N	I
Query Conservation
Alig confidence		.	.	.	.	.	.																								.	.	.	.
Template Conservation		.	.	.	.	.	.																								.	.	.	.
Template Sequence		.	.	.	.	.	.	S	F	S	Q	R	L	P	L	N	I	E	E	A	K	D	R	L	R	I	L	M	L	R	.	.	.	.	K	H	P	R	S	L	L	I	L	D	D	V
Template Known Secondary structure		.	.	.	.	.	.		S		S	S				S															.	.	.	.	T		T	T
Template Predicted Secondary structure		.	.	.	.	.	.																								.	.	.	.
Template SS confidence
								211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions