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Job Description | P0ABB4 | Confidence | 93.15% | Date | Thu Jan 5 11:15:05 GMT 2012 |
Rank | 228 | Aligned Residues | 64 |
% Identity | 17% | Template | c3cf1C_ |
PDB info |
PDB header:transport protein | Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; |
PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
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Resolution | 4.40 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
V | G | L | F | G | G | A | G | V | G | K | T | V | N | M | M | E | L | I | R | N | I | A | I | E | H | S | G | Y | S | V | F | A | G | . |
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V | G | E | R | T | R | E | G | N | D | F | Y | H | E | M | T | D | S | N | V | I | D | K | V | S | L | V | Y | G | Q | M | N | E | P | P | G | N |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | L | F | Y | G | P | P | G | C | G | K | T | L | L | A | K | A | I | A | N | E | C | . |
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Q | A | N | F | I | S | I | K | G | P | E | L | L | T | M | W | F | G | E | S | E | A | N | V | R | E | I | F | D | K | A | R | Q | A | . |
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A | P | C | V | L | F | F | D | E | L | D | S | I | A | K | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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514 | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | |
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. | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | |
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570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . |
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217 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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586 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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