 |
Job Description | P0ABB4 | Confidence | 94.70% | Date | Thu Jan 5 11:15:05 GMT 2012 |
Rank | 127 | Aligned Residues | 91 |
% Identity | 16% | Template | c2qy9A_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:cell division protein ftsy; |
PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
|
Resolution | 1.90 Å |
|
 |
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | G | G | K | V | G | L | F | G | G | A | G | V | G | K | T | V | N | M | M | E | L | I | R | N | I | A | I | E | H | S | G | Y | S | V | F | A | G | V | G | E | R | T | R | E | G | N | D | F | Y | H | E | M | T | D | S | N | V | I | D | K | V | S | L | V | Y | G | Q | M | N | E | P | P | G | N | R | L | R | V |
Query Conservation |   |
|   |
|
|
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|
|   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |
Template Sequence |   |
K | A | P | F | V | I | L | M | V | G | V | N | G | V | G | K | T | T | T | I | G | K | L | A | R | Q | F | E | Q | Q | G | K | S | V | M | L | A | A | G | D | T | F | R | A | A | A | V | E | Q | L | Q | V | W | G | Q | R | N | N | I | P | . |
. |
. |
. |
V | I | A | Q | H | T | G | A | D | S | A | S | . |
. |
. |
. |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . |  |  |
|
| S | T | T |
|
|  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | |
|
|
|
. | . | . | . | . | . | . | . | . | 360 | . | . | |
|
|
|
  |
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | T | G | L | T | M | A | E | K | F | R | D | E | G | R | D | V | L | L | F |
Query Conservation |   |
  |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
. |
. |
V | I | F | D | A | I | Q | A | A | K | A | R | N | I | D | V | L | I | A |
Template Known Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
363 | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|