Job Description P0ABB4 Confidence 92.20% Date Thu Jan 5 11:15:05 GMT 2012 Rank 290 Aligned Residues 95 % Identity 17% Template c1qzwC_ PDB info PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication Resolution 4.10 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	P	F	A	K	G	G	K	V	G	L	F	G	G	A	G	V	G	K	T	V	N	M	M	E	L	I	R	N	I	A	I	E	H	S	G	Y	S	V	F	A	G	V	G	E	R	T	R	E	G	N	D	F	Y	H	E	M	T	D	S	N	V	I	D	K	V	S	L	V	Y	G	Q	M	N	E	P	P	G	N
Query Conservation
Alig confidence																																																																		.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		V	N	P	T	K	L	P	F	I	I	M	L	V	G	V	Q	G	S	G	K	T	T	T	A	G	K	L	A	Y	F	Y	K	K	R	G	Y	K	V	G	L	V	A	A	D	V	Y	R	P	A	A	Y	D	Q	L	L	Q	L	G	N	Q	I	G	V	Q	.	.	.	.	V	Y	G	E	P	N	N	Q	N	P	I	E
Template Known Secondary structure			S		S	S	S	S								S	S	S	S	S	S	T	T	T										T	T	S					B						S	S	S		S											T	T			.	.	.	.					S	S				T	T
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	V	A	L	T	G	L	T	M	A	E	K	F	R	D	E	G	R	D	V	L	L	F
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		I	A	K	K	G	.	.	.	.	.	.	V	D	I	F	V	K	N	K	M	D	I	I	I	V
Template Known Secondary structure							.	.	.	.	.	.							T	T		S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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