Job Description P0AC75 Confidence 98.44% Date Thu Jan 5 11:17:28 GMT 2012 Rank 54 Aligned Residues 305 % Identity 13% Template c3tovB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase family 9; PDBTitle: the crystal structure of the glycosyl transferase family 9 from2 veillonella parvula dsm 2008 Resolution 2.98 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.									110	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		L	K	P	G	G	I	M	L	H	S	V	S	V	G	E	T	L	A	A	I	P	L	V	R	A	L	R	H	R	Y	P	D	L	P	I	T	V	T	T	M	T	P	T	G	S	E	R	V	Q	S	A	F	G	K	D	V	Q	H	V	Y	L	P	Y	D	.	.	.	.	.	.	.	.	L	P	D	A	L	N	R	F
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence																																							.	.																										.	.	.	.	.	.	.	.
Template Conservation																																							.	.
Template Sequence		D	Y	K	R	I	V	V	T	F	L	X	H	L	G	D	V	I	L	T	T	P	F	L	E	V	L	R	K	A	A	P	H	S	H	I	T	Y	.	.	V	I	D	E	K	L	Q	Q	V	X	E	Y	N	P	N	I	D	E	L	I	V	V	D	K	K	G	R	H	N	S	I	S	G	L	N	E	V	A	R	E	I
Template Known Secondary structure		S	S	S																T												T	T						.	.				G	G	G	G	G	G	T	T	T		T	T		S							T	T	T	T	T	S	S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	K	V	D	P	K	L	V	L	I	M	E	T	E	L	W	P	N	L	I	A	A	L	H	K	R	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	A	A	G	Y	A	K	L	G	K	F	V	R	R	L	L	R	R	I	T	L	I	A	A	Q	N	E	E	D	G	A	R	F	V	A	L	G	A	K
Query Conservation
Alig confidence													.	.																																					.	.	.	.	.	.	.	.	.
Template Conservation													.	.																																					.	.	.	.	.	.	.	.	.
Template Sequence		N	A	K	G	K	T	D	I	V	I	N	.	.	L	H	P	N	E	R	T	S	Y	L	A	W	K	I	H	A	P	I	T	T	G	X	S	H	F	L	F	R	P	F	X	T	K	Y	T	R	.	.	.	.	.	.	.	.	.	L	D	R	K	T	R	H	A	A	D	X	Y	I	N	V	L	E	Q	L	G	V	T
Template Known Secondary structure													.	.				S													S								G	G	G	G	G	G		S					.	.	.	.	.	.	.	.	.			T	T	T	S														T
Template Predicted Secondary structure													.	.																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																		.	.	.																															.	.
Query SS confidence																																		.	.	.																															.	.
Query Sequence		N	N	Q	V	T	V	T	G	S	L	K	F	D	I	S	V	T	P	Q	L	A	A	K	A	V	T	L	R	R	Q	W	A	.	.	.	P	H	R	P	V	W	I	A	T	S	T	H	E	G	E	E	S	V	V	I	A	A	H	Q	A	L	L	Q	Q	F	.	.	P	N	L	L	L	I	L	V	P	R	H	P	E
Query Conservation																																		.	.	.																															.	.
Alig confidence			.	.	.	.	.																											.	.	.																															.	.
Template Conservation			.	.	.	.	.
Template Sequence		D	.	.	.	.	.	T	S	N	S	G	L	H	I	E	I	C	E	E	W	R	C	Q	A	Q	E	F	Y	S	S	H	G	L	T	D	T	D	I	L	I	G	F	N	I	G	S	A	V	P	E	K	R	W	P	A	E	R	F	A	H	V	A	D	Y	F	G	R	L	G	Y	K	T	V	F	F	G	G	P	X	D
Template Known Secondary structure			.	.	.	.	.					S	S																		T	T	T			T	T											S	S	G	G	G																	T	T									G	G	G
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		151						.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	P	D	A	I	N	L	V	R	Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P	S	T	S	T	Q	V	V	V	G	D	T	M	G	E	L	M	L	L	Y	G	I	A	D	L	A	F	V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H	A	I	P	V	L	M	G	P	H	T
Query Conservation
Alig confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation		.	.																								.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		.	.	L	E	X	V	Q	P	V	V	E	Q	X	E	T	K	P	I	V	A	T	G	K	F	Q	.	.	.	.	.	.	.	.	.	.	.	L	G	P	L	A	A	A	X	N	R	C	N	L	L	I	T	N	D	S	.	.	.	.	.	.	G	P	X	H	V	G	I	S	Q	G	V	P	I	V	A	L	Y	G	P
Template Known Secondary structure		.	.										T		S	S						T	T				.	.	.	.	.	.	.	.	.	.	.												S						S	S	.	.	.	.	.	.									T	T									S
Template Predicted Secondary structure		.	.																								.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
				226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.												.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.																					.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	F	K	D	I	C	A	R	L	E	Q	A	S	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	V	T	D	A	T	T	L	A	K	E	V	S	S	L	L	T	D
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	P	F	F	Y	G	P	Y	Q	A	H	A	I	V	L	E	T	X	D	S	Y	E	S	X	K	K	I	I	K	E	G	N	Y	K	G	L	S	V	I	S	E	E	Q	V	I	K	A	A	E	T	L	L	L	E
Template Known Secondary structure		S						S			S	S	S						S		S											T					T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions