Job Description P0AC75 Confidence 98.99% Date Thu Jan 5 11:17:28 GMT 2012 Rank 51 Aligned Residues 278 % Identity 12% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	R	F	L	N	K	V	D	P	K	L	V	L	I	M	E	T	E	L	W	P	N	L	I	A	A	L	H	K	R	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	A	A	G	Y	A	K	L	G	K	F	V	R	R	L	L	R	R	I	T	L	I	A	A	Q	N	E	E	D	G	A	R	F	V	A
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		I	R	S	V	C	E	S	N	G	A	A	I	F	Y	M	P	S	I	G	M	D	M	T	T	I	F	A	S	N	T	R	L	A	P	I	Q	A	I	A	L	G	H	P	A	T	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	F	I	E	Y	V	I	V	E	D	D	Y	V	G	S	.	.	.	.
Template Known Secondary structure										T		S					S			S	S	S							T	T	S			S	S							S	S		S				.	.	.	.	.	.	.	.	.	.	.	.	.		T	T								G	G	G		S		.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.														.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		L	G	A	K	N	N	Q	V	T	V	T	G	S	L	K	F	D	I	S	V	T	P	Q	L	A	A	K	A	V	T	L	R	R	Q	W	A	P	H	R	P	V	W	I	A	T	S	T	H	E	G	E	E	S	V	V	I	A	A	H	Q	A	L	L	Q	Q	F	P	N	L	L	L	I	L	.	.	V	P	R	H	P
Query Conservation																																																																											.	.
Alig confidence																.																																																											.	.
Template Conservation																.
Template Sequence		E	E	C	F	S	E	T	L	L	R	L	P	K	D	.	A	L	P	Y	V	P	S	A	L	A	P	E	K	V	D	Y	L	L	R	E	N	P	E	V	V	N	I	G	I	A	S	T	T	M	K	L	N	P	Y	F	L	E	A	L	K	A	I	R	D	R	A	K	V	K	V	H	F	H	F	A	L	G	Q	S	N
Template Known Secondary structure		G	G	G		S	S							T	T	.	S	S						T	T			S	S							S			S										S	T	T																	S	S										T
Template Predicted Secondary structure																.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	P	D	A	I	N	L	V	R	Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P	S	T	S	T	Q	V	V	V	G	D	T	M	G	E	L	M	L	L	Y	G	I	A	D	L	A	F	V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H	A	I	P	V	L	M	G	P	H
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		G	I	T	H	P	Y	V	E	R	F	I	K	S	Y	L	G	D	S	A	T	A	H	P	H	S	P	Y	.	.	.	.	.	.	.	.	.	.	.	H	Q	Y	L	R	I	L	H	N	C	D	M	M	V	.	.	N	P	F	P	F	G	N	T	N	G	I	I	D	M	V	T	L	G	L	V	G	V	C	K	T	G
Template Known Secondary structure		T	T	T													G	G	G										.	.	.	.	.	.	.	.	.	.	.									T		S				.	.			S	S	S			S									T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.												.	500	.	.	.	.	.	.	.	.	.	510	.	.			.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400							.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																			.	.	.																																	.	.	.	.	.	.									.
Query SS confidence																			.	.	.																																	.	.	.	.	.	.									.
Query Sequence		T	F	N	F	K	D	I	C	A	R	L	E	Q	A	S	G	L	.	.	.	I	T	V	T	D	A	T	T	L	A	K	E	V	S	S	L	L	T	D	A	D	Y	R	S	F	Y	G	R	H	A	V	E	.	.	.	.	.	.	V	L	Y	Q	N	Q	G	A	.	L	Q	R	L	L	Q	L	L	E	P	Y	L	P
Query Conservation																			.	.	.																																	.	.	.	.	.	.									.
Alig confidence																			.	.	.																																	.	.	.	.	.	.									.
Template Conservation
Template Sequence		A	E	V	H	E	H	I	D	E	G	L	F	K	R	L	G	L	P	E	W	L	I	A	N	T	V	D	E	Y	V	E	R	A	V	R	L	A	E	N	H	Q	E	R	L	E	L	R	R	Y	I	I	E	N	N	G	L	N	T	L	F	T	G	D	P	R	P	M	G	Q	V	F	L	E	K	L	N	A	F	L	K
Template Known Secondary structure		S	S													T	T			G	G	G			S	S																												S		T							S			T
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
		422
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		619

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions