Job Description P0AC75 Confidence 99.76% Date Thu Jan 5 11:17:28 GMT 2012 Rank 32 Aligned Residues 320 % Identity 18% Template c3othB_ PDB info PDB header:transferase/antibiotic Chain: B: PDB Molecule:calg1; PDBTitle: crystal structure of calg1, calicheamicin glycostyltransferase, tdp2 and calicheamicin alpha3i bound form Resolution 2.30 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	G	E	T	L	A	A	I	P	L	V	R	A	L	R	H	R	Y	P	D	L	P	I	T	V	T	T	M	T	P	T	G	S	E	R	V	Q	S	A	F	G	K	D	V	Q	H	V	Y	L	P	Y	D	L	P	D	A	L	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.												.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.												.	.	.	.
Template Sequence		T	H	G	H	T	Y	P	L	L	P	L	A	T	A	A	R	A	A	.	.	G	H	E	V	T	F	A	T	G	E	G	.	.	.	.	F	A	G	T	L	R	K	L	G	F	E	P	V	A	T	G	X	P	V	F	D	G	F	L	A	A	L	R	I	R	F	D	T	D	S	P	E	G	L	T	P	E	Q	L	S
Template Known Secondary structure		S					G	G	G										T	.	.	T									G	G	.	.	.	.	G							T	T							S																S		S			T	T							T
Template Predicted Secondary structure																				.	.												.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																							117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	N	K	V	D	P	K	L	V	L	I	M	E	T	E	L	W	P	N	L	I	A	A	L	H	K	R	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	A	A	G	Y	A	K	L	G	K	F	V	R	R	L	L	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																					.	.
Template Sequence		E	L	P	Q	I	V	F	G	R	V	I	P	Q	R	V	F	D	E	L	Q	P	V	I	E	R	L	R	P	D	L	V	V	Q	E	I	.	.	S	N	Y	G	A	G	L	A	A	L	K	A	G	I	P	T	I	C	H	G	V	G	R	D	T	P	D	D	L	T	R	S	I	E	E	E	V	R	G	L	A	Q	R
Template Known Secondary structure		T								T																				S						T	.	.	T												T									S					S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		176	.													.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	.	.	.	.	.	.	.	.	.	.	.	.	T	L	I	A	A	Q	N	E	E	D	G	A	R	F	V	A	L	G	A	K	N	N	Q	V	T	V	T	G	S	L	K	F	D	I	S	V	T	P	Q	L	A	A	K	A	V	T	L	R	R	Q	W	A	P	H	R	P	V	W	I	A	T	S	T	H	E	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																						.	.									.	.	.	.
Template Conservation																																					.	.									.	.	.	.
Template Sequence		L	G	L	D	L	P	P	G	R	I	D	G	F	G	N	P	F	I	D	I	F	P	P	S	L	Q	E	P	E	F	R	A	R	P	R	.	.	R	H	E	L	R	P	V	P	.	.	.	.	F	A	E	Q	G	D	L	P	A	W	L	S	S	R	D	T	A	R	P	L	V	Y	L	T	L	G	T	S	S	G	G
Template Known Secondary structure			T					S	S			G	G	G	G							S		T	T	T	S						T		T	T	.	.									.	.	.	.									G	G	G	G	G	S		T	T	S								T	T	T	T	S
Template Predicted Secondary structure																																					.	.									.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	S	V	V	I	A	A	H	Q	A	L	L	Q	Q	F	P	N	L	L	L	I	L	V	P	R	H	P	E	R	F	P	D	A	I	N	L	V	R	Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P	S	T	S	T	Q	V	V	V	G	D	T	M	G	E	L	M	L	L	Y	G	I	A	D	L	A	F
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		T	V	E	V	L	R	A	A	I	D	G	L	A	G	L	D	A	D	V	L	V	A	S	G	P	S	L	D	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	E	V	P	A	N	V	R	L	E	S	W	V	.	P	Q	A	A	L	L	P	H	V	D	L	V	V
Template Known Secondary structure															T	S	S	S							T	T	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						T	T					S			.						G	G	G		S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.																						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.					.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H	A	I	P	V	L	M	G	P	H	T	F	N	F	K	D	I	C	A	R	L	E	Q	A	S	G	L	I	T	V	T	.	.	.	.	D	A	T	T	L	A	K	E	V	S	S	L	L	T	D	A	D	Y	R	S	F	Y	G	R	H	A	V
Query Conservation																																																			.	.	.	.
Alig confidence			.	.	.	.	.																																												.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		H	.	.	.	.	.	H	G	G	S	G	T	T	L	G	A	L	G	A	G	V	P	Q	L	S	F	P	W	A	G	D	S	F	A	N	A	Q	A	V	A	Q	A	G	A	G	D	H	L	L	P	D	N	I	S	P	D	S	V	S	G	A	A	K	R	L	L	A	E	E	S	Y	R	A	G	A	R	A	V	A	A
Template Known Secondary structure			.	.	.	.	.	S												T	T									S	T	T											T	T	S						G	G	G		S															T
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		294						.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	Y	Q	N	Q	G	A	L	Q	R	L	L	Q	L	L	E	P	Y
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		E	I	A	A	X	P	.	.	G	P	D	E	V	V	R	L	L	P	G	F
Template Known Secondary structure						S		.	.						G	G	G
Template Predicted Secondary structure								.	.
Template SS confidence
		369	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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