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Job DescriptionP0AC75
Confidence99.97%DateThu Jan 5 11:17:28 GMT 2012
Rank8Aligned Residues341
% Identity13%Templatec3okaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100......... 110.........120.........130...
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Query Sequence  GETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYD. . . . . LPDALNRFLNKVDPKLVLIMETEL
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Template Sequence  GIQSYLRDFIATQDPE. . SIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAEIIREREIDNVWFGAAAP
Template Known Secondary structure  TS
GG..G
S
TT
SSSSSS



TT
SSS
TT
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   20.........30..... ....40.........50.........60.........70.........80.........90.......
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  WPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISV
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Template Sequence  LALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRF
Template Known Secondary structure  GGGGTT
S

S
SSSTT

TT
SS
TTTT
SSS



B
TTTS
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   214.....220.........230.. .......240.........250.........260.........270.........280.........
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Query Sequence  TPQLAAKAVTLRRQWAPHR. . . . PVWIATSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYI
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Template Sequence  TPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDV. . . . . .
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T

TT

S
SSGGG

TT



TTTGGG......
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   178.180.........190.........200.........210.........220.........230.........240.........250.
 
   290.........300.........310.........320..... ....330.........340.........350.........360...
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Query Sequence  TRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVG. . . . . . GSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICARLE
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Template Sequence  . . . . . . . . SQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIA. GTSGGAPETVTP. .
Template Known Secondary structure  ........GGGS


S



BGGGTB


S
TT

.SSTTGGGG

T..
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   252.......260.........270.........280.........290.........300........ .310.........320
 
   364.....370.........380.........390.........400..... ....410........
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Query Sequence  QASGLITVTDATTLAKEVSSLLTDADYRSFYGRHAVEVLYQN. . . QGALQRLLQLLEP
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Template Sequence  ATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQS
Template Known Secondary structure  TT
TT
T
TBS
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   321........330.........340.........350.........360.........370........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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