Job Description P0AC75 Confidence 99.82% Date Thu Jan 5 11:17:28 GMT 2012 Rank 27 Aligned Residues 336 % Identity 17% Template c3iaaB_ PDB info PDB header:transferase Chain: B: PDB Molecule:calg2; PDBTitle: crystal structure of calg2, calicheamicin glycosyltransferase, tdp2 bound form Resolution 2.50 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	I	M	L	H	S	V	S	V	G	E	T	L	A	A	I	P	L	V	R	A	L	R	H	R	Y	P	D	L	P	I	T	V	T	T	M	T	P	T	G	S	E	R	V	Q	S	A	F	G	K	D	V	Q	H	V	Y	L	P	Y	D	L	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.												.	.	.
Template Sequence		H	L	L	I	V	N	V	A	S	H	G	L	I	L	P	T	L	T	V	V	T	E	L	V	R	R	G	H	R	V	S	Y	V	.	.	.	T	A	G	G	F	A	E	P	V	R	A	.	.	.	A	G	A	T	V	V	P	Y	Q	S	E	I	I	D	A	D	A	A	E	V	F	G	S	D	D	L	G	V	R	P
Template Known Secondary structure									S																		T	T							.	.	.			G	G	G							.	.	.	T	T									S	G	G	G							T	T	S		S	S
Template Predicted Secondary structure																																			.	.	.												.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
															113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	N	R	F	L	N	K	V	D	P	K	L	V	L	I	M	E	T	E	L	W	P	N	L	I	A	A	L	H	K	R	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	A	A	G	Y	A	K	L	G	K	F	V	R	R	L	L	R	R	I	T	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Conservation																																																															.	.
Template Sequence		H	L	X	Y	L	R	E	N	V	S	V	L	R	A	T	A	E	A	L	D	G	D	V	P	D	L	V	L	Y	D	D	F	P	F	I	A	G	Q	L	L	A	A	R	W	R	R	P	A	V	R	L	S	A	A	F	A	S	N	E	H	Y	.	.	S	F	S	Q	D	X	V	T	L	A	G	T	I	D	P	L	D
Template Known Secondary structure																					S	S	S			S						S	T	T												T								S	S					S	S		.	.		T	T								T				G	G	G
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	A	Q	N	E	E	D	G	A	R	F	V	A	L	G	A	K	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	T	V	T	G	S	L	K	F	D	I	S	V	T	P	Q	L	A	A	K	A	V	T	L	R	R	Q	W	A	P	H	R	P	V	W	I	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	V	F	R	D	T	L	R	D	L	L	A	E	H	G	L	S	R	S	V	V	D	C	W	N	H	V	E	Q	L	N	L	V	F	V	P	K	A	F	Q	I	A	G	D	T	F	D	D	R	F	V	F	V	G	P	C	F	D	D	R	R	F	L	G	E	W	T	R	P	A	D	D	L	P	V	V	L	V	S
Template Known Secondary structure		S														T	T		S								T				S					S	S		T	T	T	S	T	T	G	G	G			T	T												G	G	G							S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	T	H	E	G	E	E	S	V	V	I	A	A	H	Q	A	L	L	Q	Q	F	P	N	L	L	L	I	L	V	P	R	H	P	E	R	F	P	D	A	I	N	L	V	R	Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P	S	T	S	T	Q	V	V	V	G	D	T	M	G	E	L	M	L	L	Y	G
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		L	G	T	T	F	N	D	R	P	G	F	F	R	D	C	A	R	A	F	D	G	Q	P	W	H	V	V	X	T	L	G	G	Q	V	D	P	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	D	L	P	P	N	V	E	A	H	R	W	V	P	H	V	K	V	L	.	.
Template Known Secondary structure				S	S	S														T	T	T	S	S								T	T	S	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G					T	T					S									.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.																					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.					.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		I	A	D	L	A	F	V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H	A	I	P	V	L	M	G	P	H	T	F	N	F	K	D	I	C	A	R	L	E	Q	A	S	G	L	I	T	V	T	.	.	.	.	D	A	T	T	L	A	K	E	V	S	S	L	L	T	D	A	D	Y	R	S	F
Query Conservation																																																									.	.	.	.
Alig confidence		.	.	.	.																																																				.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	Q	A	T	V	C	V	T	H	G	G	X	G	T	L	X	E	A	L	Y	W	G	R	P	L	V	V	V	P	Q	S	F	D	V	Q	P	X	A	R	R	V	D	Q	L	G	L	G	A	V	L	P	G	E	K	A	D	G	D	T	L	L	A	A	V	G	A	V	A	A	D	P	A	L	L	A	R
Template Known Secondary structure		.	.	.	.		T		S					S												T	T									S	G	G	G										T	T	S						G	G	G															T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	R	H	A	V	E	V	L	Y	Q	N	Q	G	A	L	Q	R	L	L	Q	L	L	E	P	Y	L
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		V	E	A	X	R	G	H	V	R	R	A	G	.	.	G	A	A	R	A	A	D	A	V	E	A	Y	L
Template Known Secondary structure												S		.	.
Template Predicted Secondary structure														.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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