Job Description P0AC75 Confidence 99.25% Date Thu Jan 5 11:17:28 GMT 2012 Rank 49 Aligned Residues 259 % Identity 8% Template c3hbmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:udp-sugar hydrolase; PDBTitle: crystal structure of pseg from campylobacter jejuni Resolution 1.80 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	L	A	A	I	P	L	V	R	A	L	R	H	R	Y	P	D	L	P	I	T	V	T	T	M	T	P	T	G	S	E	R	V	Q	S	A	F	G	K	D	V	Q	H	V	Y	L	P	Y	D	L	P	D	A	L	N	R	F	L	N	K	V	D	P	K	L	V	L	I	M	E	T	E	L	W	P	N	L	I
Query Conservation
Alig confidence															.	.	.	.																		.	.	.	.	.	.
Template Conservation															.	.	.	.																		.	.	.	.	.	.
Template Sequence		G	H	I	K	R	D	L	V	L	A	K	Q	Y	.	.	.	.	S	D	V	S	F	A	C	L	P	L	E	G	S	L	I	D	E	.	.	.	.	.	.	I	P	Y	P	V	Y	E	L	S	S	E	S	I	Y	E	L	I	N	L	I	K	E	E	K	F	E	L	L	I	I	D	H	Y	G	I	S	V	D	D	E
Template Known Secondary structure												T	T		.	.	.	.	S	S									T	T			G	G	G	.	.	.	.	.	.			S						S	S	S													T		S							T	T
Template Predicted Secondary structure															.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		139	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	A	L	H	K	R	.	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	A	A	G	Y	A	K	L	G	K	F	V	R	R	L	L	R	R	I	T	L	I	A	A	Q	N	E	E	D	G	A	R	F	V	A	L	G	A	K	N	N	Q	V	T	V	T	G	S	L	K	F	D	I	S	V	T	P	Q	L
Query Conservation								.
Alig confidence								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																					.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																					.	.	.	.	.	.
Template Sequence		K	L	I	K	L	E	T	G	V	K	I	L	S	F	D	D	E	I	K	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	C	D	I	L	L	N	V	N	A	.	Y	A	K	A	S	D	Y	E	G	L	V	P	K	C	E	V	R	C	G	F	.	.	.	.	.	.	S	Y	A	L	I
Template Known Secondary structure																	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S						S	T	.	T			G	G	G	G	T	T	T									S	G	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																					.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																		.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	A	V	T	L	R	R	Q	W	A	P	H	R	P	V	W	I	A	T	S	T	H	E	G	E	E	S	V	V	I	A	A	H	Q	A	L	L	Q	Q	F	P	N	L	L	L	I	L	V	P	R	H	P	E	R	F	P	D	A	I	N	L	V	R	Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P
Query Conservation
Alig confidence																																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	E	F	Y	Q	E	A	K	E	N	R	K	K	K	Y	D	F	F	I	C	X	G	G	T	D	I	K	N	L	S	L	Q	I	A	S	E	L	P	K	T	.	.	K	I	I	S	I	A	T	S	S	S	N	P	N	L	K	K	L	Q	K	F	A	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T															S			T	T										S		T	T	.	.	S								T	T		T	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	T	Q	V	V	V	G	D	T	M	G	E	L	M	L	L	Y	G	I	A	D	L	A	F	V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H	A	I	P	V	L	M	G	P	H	T	F	N	F	K	D	I	C	A	R	L	E	Q	A	S	G	L	I	T	V	T	D	A	T
Query Conservation
Alig confidence		.	.																												.	.	.	.	.	.
Template Conservation		.	.																												.	.	.	.	.	.
Template Sequence		.	.	H	N	N	I	R	L	F	I	D	H	E	N	I	A	K	L	X	N	E	S	N	K	L	I	I	S	A	.	.	.	.	.	.	S	S	L	V	N	E	A	L	L	L	K	A	N	F	K	A	I	C	Y	V	K	N	Q	E	S	T	A	T	W	L	A	K	K	G	Y	E	V	E	Y	K	Y	L	E
Template Known Secondary structure		.	.		S	S						S		S								T								S	.	.	.	.	.	.	S									T	T									S	G	G	G										T	T						G	G	G	S
Template Predicted Secondary structure		.	.																												.	.	.	.	.	.
Template SS confidence
				207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions