 |
Job Description | P0AC75 | Confidence | 53.14% | Date | Thu Jan 5 11:17:28 GMT 2012 |
Rank | 94 | Aligned Residues | 104 |
% Identity | 13% | Template | c3cx3A_ |
PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:lipoprotein; |
PDBTitle: crystal structure analysis of the streptococcus pneumoniae2 adcaii protein
|
Resolution | 2.40 Å |
|
 |
  |   |
316 | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | |
. | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | |
|
. | . | . | 390 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
Y | G | I | A | D | L | A | F | V | G | G | S | L | V | E | R | G | G | H | N | P | L | E | A | A | A | H | . |
A | I | P | V | L | M | G | P | H | T | F | N | F | K | D | I | C | A | R | L | E | Q | A | S | G | L | I | T | V | T | D | A | T | T | L | A | K | E | V | S | S | L | L | T | . |
. |
D | A | D | Y | R | S |
Query Conservation |   |
  |   |   |
|
|
|   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   | . |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   | . | . |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |
Template Sequence |   |
I | Y | D | A | D | V | F | V | Y | H | S | H | T | L | E | S | W | A | G | S | L | D | P | N | L | K | K | S | K | V | K | V | L | E | A | S | E | G | X | T | L | E | R | V | P | G | T | L | Y | D | P | H | T | W | L | D | P | E | K | A | G | E | E | A | Q | I | I | A | D | K | L | S | E | V | D | S | E | H | K | E |
Template Known Secondary structure |   |
 |  |  | S | S |  |  |  |  | S |
| T | T | T | S |
| T | T | T | T |
|
| T | T | T | T | T |
|
|
|  |  |  |  | T | T | T | T |
|
|
|
| B |
|
|
|
|
| B |
|
|
| G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | G | G | G |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
  |   |
393 | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | Y | G | R | H | A | V | E | V | L | Y | Q | N | Q | G | A | L | Q | R | L | L | Q | L | L | E | P | Y |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | Y | Q | K | N | A | Q | A | F | I | K | K | A | Q | E | L | T | K | K | F | Q | P | K | F | E | K | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|