Job Description P0AC75 Confidence 99.96% Date Thu Jan 5 11:17:28 GMT 2012 Rank 12 Aligned Residues 354 % Identity 17% Template c2x6rA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret from p.2 horikoshi produced by soaking in trehalose Resolution 2.20 Å

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		44	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																																													.	.
Query SS confidence													.	.																																													.	.
Query Sequence		H	P	L	K	P	G	G	I	M	L	H	.	.	S	V	S	V	G	E	T	L	A	A	I	P	L	V	R	A	L	R	H	R	Y	P	D	L	P	I	T	V	T	T	M	T	P	T	G	S	E	R	V	Q	S	A	F	G	.	.	K	D	V	Q	H	V	Y	L	P	Y	D	L	P	D	A	L	N	R	F	L	N
Query Conservation													.	.																																													.	.
Alig confidence													.	.																																													.	.
Template Conservation
Template Sequence		K	L	K	G	R	S	F	V	H	V	N	S	T	S	F	G	G	G	V	A	E	I	L	H	S	L	V	P	L	L	R	S	I	G	I	E	A	R	W	F	V	I	E	G	P	T	E	F	F	N	V	T	K	T	F	H	N	A	L	Q	G	N	E	S	L	K	L	T	E	E	M	K	E	L	Y	L	N	V	N	R
Template Known Secondary structure		T	T	T	T								S		S	S	S	S	T														T	T	T																											T		S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		K	V	.	.	.	.	.	.	.	D	P	K	L	V	L	I	M	E	T	E	L	W	P	N	L	I	A	A	L	H	K	R	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	A	A	G	Y	A	K	L	G	K	F	V	R	R	L	L	R	R	I	T	L	I	A	A	Q	N	E	E	D	G	A	R	F	V
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.											.	.																									.	.	.																										.	.	.	.
Template Conservation																					.	.																									.	.	.																										.	.	.	.
Template Sequence		E	N	S	K	F	I	D	L	S	S	F	D	Y	V	L	V	H	D	P	.	.	Q	P	A	A	L	I	E	F	Y	E	K	K	S	P	W	L	W	R	C	H	I	D	L	S	.	.	.	S	P	N	R	E	F	W	E	F	L	R	R	F	V	E	K	Y	D	R	Y	I	F	H	L	P	.	.	.	.	E	Y	V
Template Known Secondary structure				T	T	S	S		G	G	G	S	S						S	S	.	.	T	T	G	G	G	G	G	G	S				S								S			S	.	.	.	S														T	T	S	S					S	S	G	.	.	.	.	G	G	S
Template Predicted Secondary structure																					.	.																									.	.	.																										.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.																			.	.
Query SS confidence																																.	.	.	.																			.	.
Query Sequence		A	L	G	A	K	N	N	Q	V	T	V	T	G	S	L	K	F	D	I	S	V	T	P	Q	L	A	A	K	A	V	.	.	.	.	T	L	R	R	Q	W	A	P	H	R	P	V	W	I	A	T	S	T	.	.	H	E	G	E	E	S	V	V	I	A	A	H	Q	A	L	L	Q	Q	F	P	N	L	L	L	I	L
Query Conservation																																.	.	.	.																			.	.
Alig confidence																																.	.	.	.																			.	.
Template Conservation
Template Sequence		Q	P	E	L	D	R	N	K	A	V	I	M	P	P	S	I	D	P	L	S	E	K	N	V	E	L	K	Q	T	E	I	L	R	I	L	E	R	F	D	V	D	P	E	K	P	I	I	T	Q	V	S	R	F	D	P	W	K	G	I	F	D	V	I	E	I	Y	R	K	V	K	E	K	I	P	G	V	Q	L	L	L
Template Known Secondary structure			T	T	S		T	T	T								B		T	T	S	T	T	T	S														T	T			T	T	S										S	T	T	S														T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		V	P	R	H	P	E	R	F	P	D	.	.	.	.	A	I	N	L	V	R	Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P	S	T	S	T	Q	V	V	V	G	D	T	M	G	E	L	M	L	L	Y	G	I	A	D	L	A	F	V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																								.	.	.	.	.	.	.	.															.
Template Conservation																																							.	.	.	.	.	.	.	.															.
Template Sequence		V	G	V	M	A	H	D	D	P	E	G	W	I	Y	F	E	K	T	L	R	K	I	G	E	D	Y	D	V	K	V	L	T	N	L	I	G	V	.	.	.	.	.	.	.	.	H	A	R	E	V	N	A	F	Q	R	A	S	D	V	.	I	L	Q	M	S	I	R	E	G	F	G	L	T	V	T	E	A	M	W	K
Template Known Secondary structure							T	T																T	T		T	T						G	G	G	T		.	.	.	.	.	.	.	.													S		.						S	S		S	S										T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.															.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.									.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		A	I	P	V	L	M	G	P	H	T	F	N	F	K	D	I	C	A	R	L	E	Q	A	S	G	L	I	T	V	T	D	A	T	T	L	A	K	E	V	S	S	L	L	T	D	A	D	Y	R	S	F	Y	G	R	H	A	V	E	V	L	Y	Q	N	.	.	.	Q	G	A	L	Q	R	L	L	Q	L	L	E	P	Y
Query Conservation																																																																	.	.	.
Alig confidence								.													.									.	.																																		.	.	.
Template Conservation								.													.									.	.
Template Sequence		G	K	P	V	I	G	.	R	A	V	G	G	I	K	F	Q	I	V	D	.	G	E	T	G	F	L	V	R	.	.	D	A	N	E	A	V	E	V	V	L	Y	L	L	K	H	P	E	V	S	K	E	M	G	A	K	A	K	E	R	V	R	K	N	F	I	I	T	K	H	M	E	R	Y	L	D	I	L	N	S	L
Template Known Secondary structure		T						.		S										B	.	T	T	T					S	.	.	S																																	T	B														T
Template Predicted Secondary structure								.													.									.	.
Template SS confidence
		339	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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