Job Description P0AC75 Confidence 100.00% Date Thu Jan 5 11:17:28 GMT 2012 Rank 3 Aligned Residues 352 % Identity 15% Template c2r60A_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii Resolution 1.80 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.														110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																									.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	T	L	A	A	I	P	L	V	R	A	L	R	H	R	Y	P	D	L	P	I	T	V	T	T	M	T	P	T	G	S	E	R	V	Q	S	A	F	.	.	.	.	.	G	K	D	V	Q	H	V	Y	L	P	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	D	A	L	N	R	F	L	N	K
Query Conservation																																									.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Q	L	V	Y	V	K	E	V	S	L	A	L	A	E	M	G	V	Q	V	D	I	I	T	R	R	I	K	D	E	N	W	P	E	F	S	G	E	I	D	Y	Y	Q	E	T	N	K	V	R	I	V	R	I	P	F	G	G	D	K	F	L	P	K	E	E	L	W	P	Y	L	H	E	Y	V	N	K	I	I	N	F
Template Known Secondary structure																	T	T												B	T	T	B	G	G	G			S					T	T		S	S									S		S	S				G	G	G		G	G	G
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		121						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	.	.	.	.	.	D	P	K	L	V	L	I	M	E	T	E	L	W	P	N	L	I	A	A	L	H	K	R	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	K	L	G	K	F	V	R	R	L	L	R	R	I	T	L
Query Conservation			.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	R	E	E	G	K	F	P	Q	V	V	T	T	H	Y	G	D	G	G	L	A	G	V	L	L	K	N	I	K	G	L	P	F	T	F	T	G	H	S	L	G	A	Q	K	M	E	K	L	N	V	N	T	S	N	F	K	E	M	D	E	R	F	K	F	H	R	R	I	I	A	E	R	L	T	M	S	Y	A	D	K
Template Known Secondary structure						T				S																													S	S								T	T				S	T	T	S																								S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.									.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.																		.	.
Query SS confidence																	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.																		.	.
Query Sequence		I	A	A	Q	N	E	E	D	G	A	R	F	V	A	L	.	.	.	.	.	.	.	.	G	A	K	N	N	Q	V	T	V	T	G	S	L	K	F	D	I	S	V	T	P	Q	L	A	A	K	A	V	T	.	.	.	.	.	.	.	.	L	R	R	Q	W	A	P	H	R	P	V	W	I	A	T	S	T	.	.	H
Query Conservation																	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.																		.	.
Alig confidence																	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		I	I	V	S	T	S	Q	E	R	F	G	Q	Y	S	H	D	L	Y	R	G	A	V	N	V	E	D	D	D	K	F	S	V	I	P	P	G	V	N	T	R	V	F	D	G	E	Y	G	D	K	I	K	A	K	I	T	K	Y	L	E	R	D	L	G	S	E	R	M	E	L	P	A	I	I	A	S	S	R	L	D	Q
Template Known Secondary structure					S	S							T	T	T	S	G	G	G	T	T	T			T	T		G	G	G								B		T	T	T	S	S	S																		S		G	G	G	T	T	S							S				G
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.																.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	E	E	S	V	V	I	A	A	H	Q	A	L	L	Q	Q	F	P	N	L	L	L	I	L	V	P	R	H	P	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	D	A	I	N	L	V	R	Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P	S	T	S	T	Q	V	V	V	G
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		K	K	N	H	Y	G	L	V	E	A	Y	V	Q	N	K	E	L	Q	D	K	A	N	L	V	L	T	L	R	G	I	E	N	P	F	E	D	Y	S	R	A	G	Q	E	E	K	E	I	L	G	K	I	I	E	L	I	D	N	N	D	C	R	G	K	V	S	M	F	P	L	N	S	Q	Q	E	.	.	.	.	.	.
Template Known Secondary structure		G	G											T															S	S		S	B	T	T	T	B		T	T	S																		T	T		B	T	T								S				.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	M	G	E	L	M	L	L	Y	G	I	A	D	L	A	F	V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H	A	I	P	V	L	M	G	P	H	T	F	N	F	K	D	I	C	A	R	L	E	Q	A	S	G	L	I	T	V	T	D	A	T	T	L	A	K	E	V	S	S	L	L	T
Query Conservation
Alig confidence		.															.																											.													.
Template Conservation		.															.																											.													.
Template Sequence		.	L	A	G	C	Y	A	Y	L	A	S	K	G	S	V	.	F	A	L	T	S	F	Y	E	P	F	G	L	A	P	V	E	A	M	A	S	G	L	P	A	V	V	.	T	R	N	G	G	P	A	E	I	L	D	G	.	G	K	Y	G	V	L	V	D	P	E	D	P	E	D	I	A	R	G	L	L	K	A	F	E
Template Known Secondary structure		.											T	T			.						S		B				S								T	T						.		S	S	B						T	G	G	.	G	T	S	S					T	T														S
Template Predicted Secondary structure		.															.																											.													.
Template SS confidence
			348	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		D	A	D	Y	R	S	F	Y	G	R	H	A	V	E	V	L	Y	Q	N	.	.	.	Q	G	A	L	Q	R	L	L	Q	L	L	E	P	Y	L
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		S	E	E	T	W	S	A	Y	Q	E	K	G	K	Q	R	V	E	E	R	Y	T	W	Q	E	T	A	R	G	Y	L	E	V	I	Q	E	I	A
Template Known Secondary structure																					S	B
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460