Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC75
Confidence56.60%DateThu Jan 5 11:17:28 GMT 2012
Rank90Aligned Residues122
% Identity11%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120.........130.........140..
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  AAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALH
Query Conservation      

  
    
   



  
  
                 
 
      
 
    

  
  
   

  
  
 
Alig confidence 



















































.


























Template Conservation          
        
 
 
             
                .          
           
    
Template Sequence  IEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPW. HMALRMEAYSLHPFYFNIIPELVEGCK
Template Known Secondary structure  TT
TTTS

TTS
S

SST.TT
SBGGG

Template Predicted Secondary structure 


















.




Template SS confidence 















































































   130.........140.........150.........160.........170.........180. ........190.........200........
 
   143......150.........160.........170...... ...180.........190......
Predicted Secondary structure 








.






Query SS confidence 

































.



















Query Sequence  KRKIPLVIANARLSARSAAGYAKLGKFVRRLLRR. ITLIAAQNEEDGARFVALGA
Query Conservation     

        
  
                 . 
 
   
      
  

 
Alig confidence 











...........










.



















Template Conservation    
  
  



...........       
   




 

 
      
    
Template Sequence  KNGVKLFPWTVD. . . . . . . . . . . RKEDMERMIKAGVDGIITDDPETLINLVRKGG
Template Known Secondary structure  TTT


B


...........ST
SS
TTT
Template Predicted Secondary structure 





...........









Template SS confidence 






















































   209210.........220 .........230.........240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions