Job Description P0AC75 Confidence 97.91% Date Thu Jan 5 11:17:28 GMT 2012 Rank 55 Aligned Residues 255 % Identity 13% Template c2h1fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:lipopolysaccharide heptosyltransferase-1; PDBTitle: e. coli heptosyltransferase waac with adp Resolution 2.40 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		G	G	I	M	L	H	S	V	S	V	G	E	T	L	A	A	I	P	L	V	R	A	L	R	H	R	Y	P	D	L	P	I	T	V	T	T	M	T	P	T	G	S	E	R	V	Q	S	A	F	G	K	D	V	Q	H	V	Y	L	P	Y	.	.	.	D	L	P	D	A	L	N	R	F	L	N	K	V	D	P	K	L
Query Conservation																																																														.	.	.
Alig confidence																																										.	.																			.	.	.
Template Conservation																																										.	.
Template Sequence		R	V	L	I	V	K	T	S	S	M	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	E	E	G	F	.	.	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	R	W	R	K	R	K	A	F	R	E	A	L	Q	A	K	N	Y	D	A
Template Known Secondary structure									S							T	T											S	T	T									G	G	G	.	.	T	T	G	G	G	G	S	T	T													T										T	S	S	B		S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	M	E	T	E	L	W	P	N	L	I	A	A	L	H	K	R	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	A	A	G	Y	A	K	L	G	K	F	V	R	R	L	L	R	R	I	T	L	I	A	A	Q	N	E	E	D	G	A	R	F	V	A	L	G	A	K	N	N	Q	V	T	V	T	G
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		V	I	D	A	Q	G	L	V	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	P	L	A	S	L	F	Y	.	.	.	.	.	.	.	.	.	.	.	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T	R	E	L	F	A	K	S	.	.	.	.	.	.	.
Template Known Secondary structure						S									T	G	G	G	S	B	S							T	T	T	S	S	S	G	G	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	S							S	S	S														.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.												.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		S	L	K	F	D	I	S	V	T	P	Q	L	A	A	K	A	V	T	L	R	R	Q	W	A	P	H	R	P	V	W	I	A	T	S	T	H	E	G	.	.	.	E	E	S	V	V	I	A	A	H	Q	A	L	L	Q	Q	F	P	N	L	L	L	I	L	V	P	R	H	P	E	R	F	P	D	A	I	N	L	V	R
Query Conservation																																								.	.	.
Alig confidence		.	.	.																																				.	.	.																				.	.
Template Conservation		.	.	.																																																										.	.
Template Sequence		.	.	.	L	G	Y	S	K	P	Q	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	A	D	S	G	I	R	I	.	.	K	L	P	W	G	A	P	H	E	E	E	R	A	K	R	L	A	E
Template Known Secondary structure		.	.	.		T	S				S	S							T					T												S	S	G	G	G	S													T	G	G	G	T				.	.					S	S												T
Template Predicted Secondary structure		.	.	.																																																										.	.
Template SS confidence
					152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P	S	T	S	T	Q	V	V	V	G	D	T	M	G	E	L	M	L	L	Y	G	I	A	D	L	A	F	V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H	A	I	P	V	L	M
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	.	.	.	.	.	.	G	L	S	H	L	T	A	A	L	D	R	P	N	I	T
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T						S											T	T		S						S	S	.	.	.	.	.	.									T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template SS confidence
		232															.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions