Job Description P0AC75 Confidence 99.95% Date Thu Jan 5 11:17:28 GMT 2012 Rank 16 Aligned Residues 295 % Identity 14% Template c1uquB_ PDB info PDB header:synthase Chain: B: PDB Molecule:alpha, alpha-trehalose-phosphate synthase; PDBTitle: trehalose-6-phosphate from e. coli bound with udp-glucose. Resolution 2.0 Å

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		112	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																						.																.
Query SS confidence														.																						.																.
Query Sequence		D	A	L	N	R	F	L	N	K	V	D	P	.	K	L	V	L	I	M	E	T	E	L	W	P	N	L	I	A	A	L	H	K	R	.	K	I	P	L	V	I	A	N	A	R	L	S	A	R	S	.	A	A	G	Y	A	K	L	G	K	F	V	R	R	L	L	R	R	I	T	L	I	A	A	Q	N	E	E	D	G
Query Conservation														.																						.																.
Alig confidence														.																						.																.
Template Conservation
Template Sequence		L	L	A	D	K	L	L	P	L	L	Q	D	D	D	I	I	W	I	H	D	Y	H	L	L	P	F	A	H	E	L	R	K	R	G	V	N	N	R	I	G	F	F	L	H	I	P	F	P	T	P	E	I	F	N	A	L	P	T	Y	D	T	L	L	E	Q	L	C	D	Y	D	L	L	G	F	Q	T	E	N	D	R
Template Known Secondary structure								G	G	G			T	T							S	G	G	G	T	T							T	T	T			S								S									T	T	S	T	T									T	T	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		189	190	.	.																		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		A	R	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	G	A	K	N	N	Q	V	T	V	T	G	S	L	K	F	D	I	S	V	.	.	.	.	.	T	P	Q	L	A	A	K	A	V	T	L	R	R	Q	W	A	P	H	R	P	V	W	I	A	T	S	T	H	E	G	E	E	S
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		L	A	F	L	D	C	L	S	N	L	T	R	V	T	T	R	S	A	K	S	H	T	A	W	G	K	A	F	R	T	E	V	Y	P	I	G	I	E	P	K	E	I	A	K	Q	A	A	G	P	L	P	P	K	L	A	Q	L	K	A	E	L	K	N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	L	P
Template Known Secondary structure												S							T	T					T	T																							S				G	G	G	T	T	S	T	T	T	S	T	T												G	G	G
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		247	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.	.	.	.																.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	I	A	A	H	Q	A	L	L	Q	Q	F	P	.	.	.	.	N	L	L	L	I	L	V	P	R	H	P	E	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	A	I	N	L	V	R	Q	A	G	L	S	Y	I	T	R	S	S	G	E	V	P	S	T	S	T	Q	V	V	V	G	D
Query Conservation																.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G	Q	L	G	W	T	P	L	Y	Y	L	N	Q	H	F	D	R	K	.	.	.	.	.	.	.	.
Template Known Secondary structure															G	G	G	T	T	T												T	T	S	S		T	T																			B	T	T	B		S						S						.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		T	M	G	E	L	M	L	L	Y	G	I	A	D	L	A	F	V	G	G	S	L	V	E	R	G	G	H	N	P	L	E	A	A	A	H	A	I	P	.	.	.	.	V	L	M	G	P	H	T	F	N	F	K	D	I	C	A	R	L	E	Q	A	S	G	L	I	T	V	T	D	A	T	T	L	A	K	E	V	S	S
Query Conservation																																								.	.	.	.
Alig confidence		.	.	.												.																								.	.	.	.																	.	.	.	.
Template Conservation		.	.	.												.																																												.	.	.	.
Template Sequence		.	.	.	L	L	M	K	I	F	R	Y	S	D	V	.	G	L	V	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	A	G	A	A	N	E	L	T	S	.	.	.	.	A	L	I	V	N	P	Y	D	R	D	E	V	A	A	A	L	D	R
Template Known Secondary structure		.	.	.										S		.						S	S	B	S												S		T	T	S								T	T	B	G	G	G	G	T		T	T	.	.	.	.	S					T	T
Template Predicted Secondary structure		.	.	.												.																																												.	.	.	.
Template SS confidence
					343	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.					.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		384	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.			.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure					.																				.	.
Query SS confidence					.																				.	.
Query Sequence		L	L	T	.	D	A	D	Y	R	S	F	Y	G	R	H	A	V	E	V	L	Y	Q	N	.	.	Q	G	A	L	Q	R	L	L	Q	L	L	E	P	Y	L	P	P
Query Conservation					.																				.	.
Alig confidence					.																				.	.
Template Conservation
Template Sequence		A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	I	V	K	N	D	I	N	H	W	Q	E	C	F	I	S	D	L	K	Q	I	V	P	R
Template Known Secondary structure				T																				T																S
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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