Job Description P39414 Confidence 1.69% Date Thu Jan 5 12:00:49 GMT 2012 Rank 19 Aligned Residues 188 % Identity 13% Template d2nwwa1 SCOP info Proton glutamate symport protein Proton glutamate symport protein Proton glutamate symport protein Resolution 3.20

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		Y	L	A	P	L	A	V	I	A	I	I	A	L	L	P	V	P	A	G	L	E	.	.	.	.	.	.	.	.	N	H	T	W	L	Y	F	A	V	F	T	G	V	I	V	G	L	I	L	E	P	V	P	G	A	V	V	A	M	V	G	I	S	I	I	A	I	L	S	P	W	L	L	F	S	P	E	Q	L	A	Q
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	F	A	I	I	L	G	I	A	I	T	Y	L	M	N	S	E	N	E	K	V	R	K	S	A	E	T	L	L	D	A	I	N	G	L	A	E	A	M	Y	K	I	V	N	G	V	M	Q	Y	A	P	I	G	V	F	A	L	I	A	Y	V	M	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T		S		T	T																											T	T	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	F	K	F	T	A	K	S	L	S	W	A	V	S	G	F	S	N	S	V	I	W	L	I	F	A	A	F	M	F	G	T	G	Y	E	K	T	G	L	G	R	R	I	A	L	I	L	V	K	K	M	G	H	R	T	L	F	L	G	Y	A	V	M	F	S	E	L	I	L	A	P	V	T	P	S	N	S	A	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.														.
Template Conservation		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.														.
Template Sequence		.	.	.	.	.	.	.	.	Q	G	V	H	V	V	G	E	L	A	K	V	T	A	A	V	Y	V	G	L	T	L	Q	I	L	L	V	Y	.	.	.	.	.	.	.	.	.	F	V	L	L	K	I	Y	G	I	D	P	I	S	.	F	I	K	H	A	K	D	A	M	L	T	A	F	V	T	R	S	S	S	G	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	G	G	G			T																				T		.	.	.	.	.	.	.	.	.						T	T	T						.																		T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.														.
Template SS confidence
										220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	I	I	Y	P	I	I	R	N	L	P	P	L	Y	Q	S	Q	P	N	D	S	S	S	R	S	I	G	S	Y	I	M	W	M	G	I	V	A	D	C	V	T	S	A	I	F	L	T	A	M	A	P	N	L	L	L	I	G	L	M	K	S	A	S	H	A	T	L	S	W	G	D	W	F	L	G	M	L	P
Query Conservation
Alig confidence		.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation		.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		.	.	.	.	.	L	P	V	T	M	R	V	A	K	E	M	G	I	S	E	G	I	.	.	.	.	.	.	.	.	.	Y	S	F	T	L	P	L	G	A	T	I	N	M	D	G	T	A	L	.	.	.	Y	Q	G	V	C	T	F	F	I	A	N	A	L	G	S	H	L	T	V	G	Q	Q	L	T	I	V	L	T
Template Known Secondary structure		.	.	.	.	.										T	T	T			T	T	T	.	.	.	.	.	.	.	.	.					T	T	T	T	S	S	S								.	.	.														T					S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
							282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.										.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		242	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	L	A	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions