Return to main results Retrieve Phyre Job Id

Job DescriptionP39414
Confidence1.28%DateThu Jan 5 12:00:49 GMT 2012
Rank31Aligned Residues49
% Identity8%Templatec3sokB_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:fimbrial protein; PDBTitle: dichelobacter nodosus pilin fima
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240.........250.........260.........270........
Predicted Secondary structure 









Query SS confidence 
















































Query Sequence  LSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQA
Query Conservation    
  
     
  

                                 
Alig confidence 
















































Template Conservation 



















 
        

   
             
Template Sequence  FTLIELMIVVAIIGILAAFAIPAYNDYIARSQAAEGLTLADGLKVRISD
Template Known Secondary structure 

T
Template Predicted Secondary structure 

Template SS confidence 
















































   1........10.........20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions