Job Description P39414 Confidence 1.67% Date Thu Jan 5 12:00:49 GMT 2012 Rank 20 Aligned Residues 70 % Identity 10% Template c2ziyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rhodopsin; PDBTitle: crystal structure of squid rhodopsin Resolution 3.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	D	W	F	L	G	M	L	P	L	S	I	L	L	V	L	L	V	P	W	L	A	Y	V	L	Y	P	P	V	L	K	S	G	D	Q	V	P	R	W	A	E	T	E	L	Q	A	M	G	P	L	C	S	R	E	K	R	M	L	G	L	M	V	G	A	L	V	L	W	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	M	F	I	L	G	F	F	G	P	I	L	I	I	F	F	C	Y	F	N	I	V	M	S	V	S	N	H	E	K	E	M	A	A	M	A	K	R	L	N	A	K	E	L	R	K	A	Q	A	G	A	N	A	E	M	R	L	A	K	I	S	I	V	I	V	S	Q	F	L
Template Known Secondary structure								T	T																				T								T	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions