Job Description P39414 Confidence 3.57% Date Thu Jan 5 12:00:49 GMT 2012 Rank 10 Aligned Residues 98 % Identity 16% Template c2ksfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein kdpd; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor kdpd, center for structures of3 membrane proteins (csmp) target 4312c Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	P	S	T	E	W	W	R	Y	L	A	P	L	A	V	I	A	I	I	A	L	L	P	V	P	A	G	L	E	N	H	T	W	L	Y	F	A	V	F	T	G	V	I	V	G	L	I	L	E	P	V	P	G	A	V	V	A	M	V	G	I	S	I	I	A	I	L	S	P	W	L	L	F	S	P	E	Q	L	A
Query Conservation
Alig confidence																												.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	Q	I	Q	G	S	V	V	A	A	A	L	S	A	V	I	T	L	I	A	M	Q	W	L	M	.	A	F	D	A	A	N	L	V	M	L	Y	L	L	G	V	V	V	V	A	L	F	Y	G	R	W	P	S	V	V	A	T	V	I	N	V	V	S	F	D	L	F	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S	S																				S	.	T	T	S	S			S	S															S	S				S													T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	G	F	K	F	T	A	K	S	L	S	W	A	V	S	G	F	S	N	S	V	I	W	L	I	F	A	A	F	M	F	G	T	G	Y	E	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	F	I	A	P	R	G	T	L	A	V	S	D	V	Q	Y	L	L	T	F	A	V	M	L	T	V	G	L	V	I	G	N
Template Known Secondary structure		.	.	.	.	.	.	.	T	S		S	S		T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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