Job Description P39414 Confidence 1.19% Date Thu Jan 5 12:00:49 GMT 2012 Rank 36 Aligned Residues 93 % Identity 15% Template c2gfpA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:multidrug resistance protein d; PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli Resolution 3.50 Å

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		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	Y	L	L	R	Y	F	F	A	S	A	T	A	Y	T	S	A	L	A	P	M	M	I	A	A	A	L	A	M	P	E	I	P	L	P	V	F	C	L	M	V	G	A	A	I	G	L	G	S	I	L	T	P	Y	A	T	G	P	S	P	I	Y	Y	G	S	G	Y	L	P	T	A	D	Y	W	R	L	G	A	I
Query Conservation
Alig confidence																	.																																											.	.	.	.	.	.	.
Template Conservation																	.																																											.	.	.	.	.	.	.
Template Sequence		L	L	M	L	V	L	L	V	A	V	G	Q	M	A	Q	.	T	I	Y	I	P	A	I	A	D	M	A	R	D	L	N	V	R	E	G	A	V	Q	S	V	M	G	A	Y	L	L	T	Y	G	V	S	Q	L	F	Y	G	P	I	.	.	.	.	.	.	.	S	D	R	V	G	R	R	P	V	I	L	V	G	M	S
Template Known Secondary structure																	.												T	T	S	S	S	T	T																			T	T					.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																	.																																											.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	I	F	L	V	L	L	V	I	T	G	L	L	W	M	P	V	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	M	L	A	T	L	V	A	V	T	T	S	S	L	T	V	L	I	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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