Job Description P39414 Confidence 6.05% Date Thu Jan 5 12:00:49 GMT 2012 Rank 4 Aligned Residues 112 % Identity 11% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	A	P	V	T	P	S	N	S	A	R	G	A	G	I	I	Y	P	I	I	R	N	L	P	P	L	Y	Q	S	Q	P	N	D	S	S	S	R	S	I	G	S	Y	I	M	W	M	G	I	V	A	D	C	V	T	S	A	I	F	L	T	A	M	A	P	N	L	L	L	I	G	L	M	K	S	A	S	H	A	T
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.																																				.
Template Conservation																										.	.	.	.	.	.	.	.																																				.
Template Sequence		V	G	Q	A	T	I	V	E	I	F	L	T	L	Q	F	V	L	C	I	F	A	T	Y	D	.	.	.	.	.	.	.	.	E	R	R	N	G	R	L	G	S	V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	Y	T	G	A	G	M	N	P	.	A	R	S	F	A	P	A	I	L	T	R	N
Template Known Secondary structure																										.	.	.	.	.	.	.	.	T	T	S		S																															.											T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																																				.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	W	G	D	W	F	L	G	M	L	P	L	S	I	L	L	V	L	L	V	P	W	L	A	Y	V	L	Y	P	P	V	L	K	S	G	D	Q	V	P	R	W	A	E
Query Conservation
Alig confidence						.								.	.
Template Conservation						.								.	.
Template Sequence		F	T	N	H	.	W	V	Y	W	V	G	P	.	.	V	I	G	A	G	L	G	S	L	L	Y	D	F	L	L	F	P	R	L	K	S	V	S	E	R	L	S	I	L	K
Template Known Secondary structure			T	T	T	.	T							.	.													T	T	T	S
Template Predicted Secondary structure						.								.	.
Template SS confidence
		198	.	200	.		.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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