Job Description P39414 Confidence 1.59% Date Thu Jan 5 12:00:49 GMT 2012 Rank 21 Aligned Residues 115 % Identity 11% Template c1p7bB_ PDB info PDB header:metal transport Chain: B: PDB Molecule:integral membrane channel and cytosolic domains; PDBTitle: crystal structure of an inward rectifier potassium channel Resolution 3.65 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	L	G	R	R	I	A	L	I	L	V	K	K	M	G	H	R	T	L	F	L	G	Y	A	V	M	F	S	E	L	I	L	A	P	V	T	P	S	N	S	A	R	G	A	G	I	I	Y	P	I	I	R	N	L	P	P	L	Y	Q	S	Q	P	N	D	S	S	S	R	S	I	G	S	Y	I	M	W	M	G
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	G	M	P	A	S	V	W	R	D	L	Y	Y	W	A	L	K	V	S	W	P	V	F	F	A	S	L	A	A	L	F	V	V	N	N	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	L	L	Y	Q	L	G	D	A	P	I	A	N	Q	S	P	P	G	F	V	G	A	F	F	F	S	V
Template Known Secondary structure																				S																				.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	S	S	S	S	S					S	S	S	S	S	T								T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.															.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		198	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		I	V	A	D	C	V	T	.	S	A	I	F	L	T	A	M	A	P	N	L	L	L	I	G	L	M	K	S	A	S	H	A	T	L	S	W	G	D	W	F	L	G	M	L	P	L	S	I	L	L	V	L	L	V	P	W	L	A	Y	V	L	Y	P	P	V	L	K
Query Conservation									.
Alig confidence									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	L	A	T	V	G	Y	G	D	M	H	P	Q	T	V	Y	A	H	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	E	I	F	V	G	M	S	G	I	A	L	S	T	G	L	V	F	A	R	F	A	R	P	R	A	K
Template Known Secondary structure		T	T	T	T	T				S						S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions