Job Description P17583 Confidence 100.00% Date Thu Jan 5 11:36:14 GMT 2012 Rank 1 Aligned Residues 382 % Identity 12% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	L	V	L	V	L	I	G	L	N	M	R	P	L	L	T	S	V	G	P	L	L	P	Q	L	R	Q	A	S	G	M	S	F	S	V	A	A	L	L	T	A	L	P	V	V	T	M	G	G	L	A	L	A	G	S	W	L	H	Q	H	V	S	E	R	R	S	V	A	I	S	L	L	L	I	A	V	G	A	L
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	V	.	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P	R	V	F	L	P	A	G	L	I	L	A	A	A	V	M	L
Template Known Secondary structure																		T	S								T	T	.	S	S	T	T		S	S																											S
Template Predicted Secondary structure																													.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		81	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																							.
Query SS confidence				.	.	.	.																																							.
Query Sequence		M	R	.	.	.	.	E	L	Y	P	Q	S	A	L	L	L	S	S	A	L	L	G	G	V	G	I	G	I	I	Q	A	V	M	P	S	V	I	K	R	R	F	Q	Q	R	.	T	P	L	V	M	G	L	W	S	A	A	L	M	G	G	G	G	L	G	A	A	I	T	P	W	L	V	Q	H	S	E	T	W	Y	Q
Query Conservation				.	.	.	.																																							.
Alig confidence				.	.	.	.																																							.
Template Conservation
Template Sequence		F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G	G	G	I	P	P	L	L	F	L	L	G	M	A	W	F	N	D	W	H	A
Template Known Secondary structure											S	S	S	S																T										T	T		T	T	T																		T	S												T			S	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.													.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	A	W	W	A	L	P	A	V	V	A	L	F	A	W	W	W	Q	S	A	R	E	V	A	S	S	H	K	T	T	T	T	P	V	R	V	V	F	T	P	R	.	.	.	.	.	.	.	.	.	.	.	.	A	W	T	L	G	V	Y	F	G	L	I	N	G	G	Y	A	S	L	I	A	W	L	P	A	F	Y
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y	L	K
Template Known Secondary structure			T																					S	S	T	T	T				S		T	T	T						T							T	S	S																													B	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		I	E	I	G	A	S	A	Q	Y	S	G	S	L	L	A	L	M	T	L	G	Q	A	A	G	A	L	L	M	P	A	M	A	R	H	Q	D	R	R	K	L	L	M	L	A	L	V	L	Q	L	V	G	F	C	G	F	I	W	L	.	.	.	.	.	P	M	Q	L	P	V	L	W	A	M	V	C	G	L	G	L	G
Query Conservation																																																												.	.	.	.	.
Alig confidence																																																												.	.	.	.	.
Template Conservation
Template Sequence		E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T	V	D	M	I	C	M	I	V	I	G	F	L	I
Template Known Secondary structure		T	B	S																																T	S	T	T																				T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		G	A	F	P	L	C	L	L	L	A	L	D	H	S	V	Q	P	A	I	A	G	K	L	V	A	F	M	Q	G	I	G	F	I	I	A	G	L	.	A	P	W	F	S	G	V	L	R	S	I	S	G	N	Y	L	M	D	W	A	F	H	A	L	C	V	V	G	L	M	I	I	T	L	R	F	A	P	V	R	F	P
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M	I	G	G	S	I	L	A	V	I	L	L	I	V	V	M	I	G	E	K	R	R
Template Known Secondary structure		T													T	S		T	T																															S	S		S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		378	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	W	V	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	Q	L	L	Q
Template Known Secondary structure				G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions