Return to main results Retrieve Phyre Job Id

Job DescriptionP17583
Confidence2.91%DateThu Jan 5 11:36:14 GMT 2012
Rank12Aligned Residues10
% Identity20%Templatec3jtzA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:integrase; PDBTitle: structure of the arm-type binding domain of hpi integrase
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380....
Predicted Secondary structure 






Query SS confidence 









Query Sequence  RFPQLWVKEA
Query Conservation 
 
   
  
Alig confidence 









Template Conservation   

  

  
Template Sequence  AYPAISLSDA
Template Known Secondary structure  TTTS
Template Predicted Secondary structure 





Template SS confidence 









   55....60....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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