Return to main results Retrieve Phyre Job Id

Job DescriptionP17583
Confidence1.07%DateThu Jan 5 11:36:14 GMT 2012
Rank78Aligned Residues32
% Identity16%Templatec2k21A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:potassium voltage-gated channel subfamily e PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   348.350.........360.........370.........
Predicted Secondary structure 








Query SS confidence 































Query Sequence  GNYLMDWAFHALCVVGLMIITLRFAPVRFPQL
Query Conservation 
                    
     
 
  
Alig confidence 































Template Conservation     
 



 

 

 
   



 





 
Template Sequence  GKLEALYVLMVLGFFGFFTLGIMLSYIRSKKL
Template Known Secondary structure 
SSTT
Template Predicted Secondary structure 

Template SS confidence 































   40.........50.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions