|   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | P | V | L | R | Y | L | A | T | K | P | E | G | A | A | A | R | D | V | H | E | A | A | A | D | A | L | . |
. |
. |
. |
G | L | D | D | S | Q | R | A | K | V | I | T | S | G | Q | L | V | Y | K | N | R | A | G | W | A | H | D | R | L | K | R | A | G | L | S | Q | S | L | S | R | G | K | W | C | L | T | P | A | G |
Query Conservation |   |
  |
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |   |   |
|   |   |   |   | . | . | . | . |   |
|
|
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|   |   |   |   |
|
|   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|   |   | . | . |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |
|
|
| . |   |   |   |
|
|   |
|   |
|
|   |   |
|
Template Sequence |   |
H | V | I | L | T | V | L | S | T | . |
. |
R | D | A | T | G | Y | D | I | T | K | E | F | S | A | S | I | G | Y | F | W | K | A | S | H | Q | Q | V | Y | R | E | L | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | M | G | E | Q | G | L | V | . |
T | C | V | L | E | V | Y | S | I | T | Q | A | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . |
|
| B |
|  |  |  |  |  |  |  |  | T | T | G | G | G | G | T |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | T | T | S |  | . |  |  |
|
|
|
|  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
| . |
|
|
|
|  |  |  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | |
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
  |   |
87 | . | . | 90 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
F | D | W | V | A | S |
Query Conservation |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
Template Sequence |   |
R | S | A | L | G | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . |
  |