Return to main results Retrieve Phyre Job Id

Job DescriptionP24202
Confidence45.00%DateThu Jan 5 11:41:11 GMT 2012
Rank76Aligned Residues59
% Identity22%Templated1xmka1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Z-DNA binding domain
Resolution0.97

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40. ........50.........60.........70.. .......80.........
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Query Sequence  VLRYLATKPEGAAARDVHEAAADALGLDD. SQRAKVITSGQLVYKNRAGWAHDRLKRAGLS. . QSLSRGKWCLTPAGFDW
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Template Sequence  ICDYLFNVSDSSALN. . . . . LAKNIGLTKARDINAVLI. . . . . . . . . . . . . . . DMERQGDVYRQGTTPPIWHLTDKKRER
Template Known Secondary structure  T

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GGG...............TTS
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   303......310....... ..320.........330..... ....340.........350.........360..
 
   90.
Predicted Secondary structure 
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Query Sequence  VA
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Template Sequence  MQ
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 

   363.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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