Job Description P24202 Confidence 90.35% Date Thu Jan 5 11:41:11 GMT 2012 Rank 22 Aligned Residues 63 % Identity 19% Template d1xmaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.
Predicted Secondary structure																										.	.	.	.																																							.	.	.	.	.	.
Query SS confidence																										.	.	.	.																																							.	.	.	.	.	.
Query Sequence		V	L	R	Y	L	A	T	K	P	E	G	A	A	A	R	D	V	H	E	A	A	A	D	A	.	.	.	.	L	G	L	D	D	S	Q	R	A	K	V	I	T	S	G	Q	L	V	Y	K	N	R	A	G	W	A	H	D	R	L	K	R	A	G	L	S	Q	S	.	.	.	.	.	.	L	S	R	G	K	W	C	L
Query Conservation																										.	.	.	.																																							.	.	.	.	.	.
Alig confidence									.	.																.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation									.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	S	L	L	I	E	.	.	G	D	S	Y	G	Y	E	I	S	K	N	I	R	I	K	T	D	E	L	Y	V	I	K	E	T	T	L	Y	S	A	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	E	K	N	G	Y	I	K	S	Y	Y	G	E	E	T	K	R	R	T	Y	Y	R	I
Template Known Secondary structure									.	.																	T	T	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S
Template Predicted Secondary structure									.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	G	F	D	W	V	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	E	G	I	K	Y	Y	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions