Job Description P24202 Confidence 89.65% Date Thu Jan 5 11:41:11 GMT 2012 Rank 24 Aligned Residues 77 % Identity 13% Template d1ussa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Linker histone H1/H5 Resolution UNK

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		P	T	Y	D	K	F	I	E	P	V	L	R	Y	L	A	T	K	P	E	G	A	A	A	R	D	V	H	E	A	A	A	D	A	L	G	L	D	D	S	Q	R	A	K	V	I	T	S	G	Q	L	V	Y	K	N	R	A	G	W	A	H	D	R	L	K	R	A	G	L	S	Q	S	L	S	R	.	.	G	K	W	C
Query Conservation																																																																												.	.
Alig confidence																					.															.	.	.	.	.	.	.	.																																	.	.
Template Conservation																					.															.	.	.	.	.	.	.	.
Template Sequence		L	T	Y	K	E	M	I	L	K	S	M	P	Q	L	N	D	G	K	G	.	S	S	R	I	V	L	K	K	Y	V	K	D	T	F	.	.	.	.	.	.	.	.	S	S	K	L	K	T	S	S	N	F	D	Y	L	F	N	S	A	I	K	K	C	V	E	N	G	E	L	V	Q	P	K	G	P	S	G	I	I	K
Template Known Secondary structure															S			T	T	S	.	B													T	.	.	.	.	.	.	.	.	T	T	T	S			S	S	T																S	S				S	S	T	T	S	S		B
Template Predicted Secondary structure																					.															.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	A	G	F	D	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	K	K	K	V	K	L
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions