Job Description P24202 Confidence 45.44% Date Thu Jan 5 11:41:11 GMT 2012 Rank 75 Aligned Residues 84 % Identity 11% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	T	V	P	T	Y	D	K	F	I	E	P	V	L	R	Y	L	A	T	K	P	E	G	A	A	A	R	D	V	H	E	A	A	A	D	A	L	G	L	D	D	S	Q	R	A	K	V	I	T	S	G	Q	L	V	Y	K	N	R	A	G	W	A	H	D	R	L	K	R	A	G	L	S	Q	S	L	S	R	G	K	.
Query Conservation																																																																																	.
Alig confidence																												.									.																	.	.	.	.																								.
Template Conservation																												.									.																	.	.	.	.
Template Sequence		M	N	L	K	D	X	E	Q	N	S	A	K	A	V	V	L	L	K	A	X	A	N	E	R	R	L	.	Q	I	L	C	X	L	H	N	.	Q	E	L	S	V	G	E	L	C	A	K	L	Q	L	S	Q	.	.	.	.	S	A	L	S	Q	H	L	A	W	L	R	R	D	G	L	V	T	T	R	K	E	A	Q	T
Template Known Secondary structure																							S					.						T	T	T	.	S												T				.	.	.	.													T	T	S							T	T
Template Predicted Secondary structure																												.									.																	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
				80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	W	C	L	T	P	A	G	F	D	W	V
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		V	Y	Y	T	L	K	S	E	E	V	K	A	X
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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