Return to main results Retrieve Phyre Job Id

Job DescriptionP24202
Confidence90.42%DateThu Jan 5 11:41:11 GMT 2012
Rank20Aligned Residues67
% Identity18%Templatec3hhhA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, padr family; PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70...... ...80....
Predicted Secondary structure 






















......


Query SS confidence 

































































. . . . . .







Query Sequence  EPVLRYLATKPEGAAARDVHEAAADALGLDDSQRAKVITSGQLVYKNRAGWAHDRLKRAGLSQSLS. . . . . . RGKWCLTP
Query Conservation   


  
   
     


   
     


 
      

      

 

   
 




    ......

   

 
Alig confidence 








..















.............

























......







Template Conservation    

  
  ..    

 
   
    .............   

 
 

  
 


  
 
          

 
 

 
Template Sequence  GLVLAIIQR. . KETYGYEITKILNDQG. . . . . . . . . . . . . FTEIVEGTVYTILLRLEKNQWVIAEKKPSEPXRKFYRLTS
Template Known Secondary structure  ..S
B
TTS.............
SS

TTS



Template Predicted Secondary structure 
..





.............















Template SS confidence 















































































   13......20. ........30....... ..40.........50.........60.........70.......
 
   85....90..
Predicted Secondary structure 
Query SS confidence 







Query Sequence  AGFDWVAS
Query Conservation   

  
  
Alig confidence 







Template Conservation   
   
  
Template Sequence  SGEAELAD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   80.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions