Job Description P24202 Confidence 73.30% Date Thu Jan 5 11:41:11 GMT 2012 Rank 47 Aligned Residues 63 % Identity 22% Template c3h0gE_ PDB info PDB header:transcription Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.																									.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	T	V	G	R	P	E	L	Q	A	F	Y	G	A	L	A	G	Q	K	A	K	R	G	V	F	I	T	T	S	G	F	T	S	Q	A	R	D	F	A	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	G	M	V	L	V	D	G	E	R	L	V	H
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	S	V	G	I	K	E	M	R	T	F	V	H	T	L	G	D	H	N	H	K	T	G	I	L	I	Y	A	N	S	M	T	P	S	A	A	K	I	I	A	T	V	T	G	Q	F	T	I	E	T	F	Q	E	S	D	L	I	V	N	I	T	H	H	E	L	V	P	K	H	I	L	L	S	P	D	E	K	K	E
Template Known Secondary structure		S	S	S			T	T	T	T	G	G	G	T						T	T		S							S	S				S					T	T	T	T	T		T	T								S	S	S	S		S		T	T	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	I	E	N	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	R	Y	K	L
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions