Job Description P24202 Confidence 36.93% Date Thu Jan 5 11:41:11 GMT 2012 Rank 84 Aligned Residues 95 % Identity 15% Template c2kkoB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:possible transcriptional regulatory protein PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e. Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		Y	D	K	F	I	E	P	V	L	R	Y	L	A	T	K	P	E	G	A	A	A	R	D	V	H	E	A	A	A	D	A	L	G	L	D	D	S	Q	R	A	K	V	I	T	S	G	Q	L	V	Y	K	N	R	A	G	W	A	H	D	R	L	K	R	A	G	L	S	Q	S	L	S	R	G	.	.	.	K	W	C	L
Query Conservation																																																																											.	.	.
Alig confidence																							.										.																.	.	.	.																							.	.	.
Template Conservation																							.										.																.	.	.	.
Template Sequence		K	A	A	L	L	D	Q	V	A	R	V	G	K	A	L	A	N	G	R	R	L	.	Q	I	L	D	L	L	A	Q	G	.	E	R	A	V	E	A	I	A	T	A	T	G	M	N	L	.	.	.	.	T	T	A	S	A	N	L	Q	A	L	K	S	G	G	L	V	E	A	R	R	E	G	T	R	Q	Y	Y	R	I
Template Known Secondary structure																	T						.							T	T		.												T				.	.	.	.														T	S							T	T
Template Predicted Secondary structure																							.										.																.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	G	F	D	W	V	A	S	H	P	Q	P	M	T	E	Q	E	T	N	H	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	E	D	V	A	R	L	F	A	L	V	Q	V	V	A	D	E	H	L	E	H	H	H
Template Known Secondary structure		S																			S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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