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Job DescriptionP24202
Confidence91.79%DateThu Jan 5 11:41:11 GMT 2012
Rank17Aligned Residues69
% Identity16%Templatec1f5tA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:diphtheria toxin repressor; PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  PTYDKFIEPVLRYLATKPEGAAARDVHEAAADALGLDDSQRAKVITSGQLVYKNRAGWAHDRLKRAGLSQSLSRGKWCLT
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Template Sequence  DTTEMYLRTIYELEEE. GVTPLRARIAERLEQS. . . . . . . . . . . GPT. . . . . . . . VSQTVARMERDGLVVVASDRSLQMT
Template Known Secondary structure  ST.T


BT

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   1006...1010.........1020. ........1030....... ..1040 .........1050.........1060.....
 
   84.....90..
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Query Sequence  PAGFDWVAS
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Template Sequence  PTGRTLATA
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   1066...1070....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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